[an error occurred while processing this directive] BDGP: X Chromosome: Source Hoskins et al.

Projects

X Chromosome: Source Hoskins et al.


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STS Cytological
location
Flanking
sequence
Nucleotide
position
Oregon R Canton S w;iso2;iso3 P strain 1
Q1028
P strain 2 Release 1
y;cnbwsp
RFLP?
Dm3513 1F1-1F3 TCACT - GGAAC 78 G(42) C(42) G(46) G(51) G
GGACA - CTCAA 90 G(42) A(44) G(35) G(35) G AluI
ACCCA - ACACT 144 C(42) A(44) C(56) C(56) C
ACAAA - ATGGG 174 A(47) T(44) A(40) A(35) A
Dm1729 2B8-2B9 GAGCT - CTCGA 477 T(51) C(56) T(40) T(42) T SacI
Dm0127 2F1-2F6 GTCGT - AGGGG 1447 C(37)AGT(40) C(40)AGG(56) C(30)AGT(42) AAGG
CGCTC - CGCTC 1450 C(35) T(42) C(32) C(35) C AciI BsrBI
Dm0106 3A6 TCTGT - GAACG G(37)TGA(37) A(56)TGG(42) G(45)TGA(34) A(35)TGG(34) ATGG
Q1028 3D-E Q1028 Q1034
Dm3247 4C7-4C8 AGTTT - CTGCG 1607 T(42) C(56) C(24) C/T(22) C/T11) T
CAGTC - GTGAA 1628 C(37) G(37) G(25) G(28) C/G(23) C
GTGAA - ACGCC 1634 C(51) T(44) T(25) C/T(19) T/C(37) C
GTTTT - CCGAA 1766 C(56) T(56) T(44) T(42) T(20) C
Dm1954 4E1 ACAAT - ATCGA 149 T(45) A(56) A(42) T(56) T(40) T Tsp509I
Dm3001 5C1-5C2 AATTC - GGATC 695 G(27) G(35) A(41) G/A(22) G(30) G
TCCAA - ACTTT 704 T(37) T(41) G(50) T(30) T(33) T
ATTTT - ACAAT 888 T(30) C(56) T(42) C(34) C(42) C
Q1034 6E Q1034 Q1030
Dm2006 7A2-7A5 CCCAG - ACATG 582 T(56) C(45) T(30) T/C(26) T/C(17) T RsaI
CCCCC - TCTTG 618 DEL(98) C(40) DEL(98) DEL(98) DEL(98) DEL
TCTTG - C 624 C(37) C(46) C(31) A/C(26) A/C(33) C
C - CAATC 626 G(40) A(45) G(20) G(42) G(42) G
ACTCG - CCAGC 647 A(40) A(35) A(42) A/T(30) A/T(29) A TaqI BspGI
Dm1849 7D10-7D16 GGTT -TCCCT 180 A(30) A(51) T(28) T(28) T(28) A
Dm0426 8C1-8C2 CATAT - TA 1223 A(51) A(51) A(42) G/A(24) G/A(28) A
TA - GTACA 1226-7 T(51)G(42) T(51)G(42) T(44)G(42) TA
ACATA - GTACT 1234 T(56) T(56) T(48) C/T(17) C/T(11) T NdeI RsaI SnaBI
TACTT - ATGTTG 1241 G(42) A(51) G(42) A(40) A(42) A MseI
ACAAC - TACAA 1352 T(40) T(40) T(42) A/T(23) A/T(14) T
Dm3169 8D1-8D5 GCCGC - CACGA 1280 T(45) T(40) T(44) C/T(13) C/T(19) T BsrBI
CCCGT - TGCTC 1373 G(37) A(29) G/A(37) G/A(30) G/A(39) G
Dm1980 9B1-9B2 GGTGA - TTCAC 35 A(48) C(40) C(40) C(40) C(40) C EcoRI Tsp509I
ATCTA - CAAAA 62 A(51) A(43) T(40) A(40) A(45) T
GCAAA - CATAA A(51)TTA(51)AAG(56) C(45)TTC(42)AAA(56) C(35)TTC(40)AAA(40) C(29)TTC(34)AAA(25) C(29)TTC(27)AAA(27) CTTCAAA MseI Tsp509I
Q1030 10E Q1030 Q1035
Dm3746 10F7-10F8 TACAC - TCTCT 79-80 G(51)C(51) A(51)A(51) G(40)C(40) A(45)A(46) A(35)A(35) AA
TCACA - CCGTA 137 G(42) T(43) G(35) T(44) T(37) T
Dm2024 11B1-11B2 GAAC(A)9 - (A)5GAT 172 A(47) C(44) A C(56) C(42) C
Q1035 13E9 Q1035
Dm0478 13A8-13A9 TGGCA - TTGGC 70 A(40) A(51) G(35) A(39) A MunI Tsp509I
AGACT - TAGTT 145 A(45) A(45) C(35) A(37) A BfaI
Dm3491 13D1-E4 CATTG - CCGCC 60 T(46) T(46) C(46) T(39) T EciI
CACTG - ACGAG 170 A(56) G(40) A(35) A(35) A BspGI
Dm1911 14B3-14B4 TGAAT - GAATG 1134 A(46)C(42) A(40)C(37) G(43)T(40) G(21)T/C(21) GT
Dm3790 15B1-15B2 TGTGC - CTTAA 106 C(44) A(45) A(37) C(50) C ApaLI CviRI
ACTAT - CGCCT 221 C(40) T(40) T(40) T(45) T AciI EciI
Dm0509 16F5-16F8 GAGGG - CCGCT 58 G(37) T(45) G(37) T(40) T HaeIII SimI
Q1035 17C
Dm1846 17A1-17A2 ATTTC - ACTTG 2150 A(37) C(45) A(42) A(46) C
Dm2754 17B5-17C4 AGTAG - GTATG 402 C(35) C(38) C(56) T(34) C
CATTT - CAGCG 423 C(33) T(42) C(40) T(22) C
TGCGG - TTCTC 444 G(42) T(38) G(40) T/G(34) GT
CAAAA - ACCGG 465 A(34) A(34) T(56) T(26) T
CCGTT - GCTAA 512 T(27) T(35) T(40) C(51) C
Dm0505 19E1-19E3 GCTGC - TGGCT 90 A(42) A(42) A(30) A(30) A CviRI NlaIII
CGGAG - ATATG 170 C(44) T(56) C(56) C(37) C NdeI
ATATA - TATTG 190 A(56) A(42) A(42) A(42) A
Dm0529 20B1-20B2 GGCTC - GTGTC 837 G(45) T(40) T(42) G(56) G