BDGP Resources

Download Miscellaneous Drosophila Sequences

Description Last updated Database (via http) Compressed version (via ftp)
All Fly Sequences
All Drosophila sequences (Release 1 data, not Release 2) 8-Apr-2004 na_all.dmel na_all.dmel.Z
Fly Genes from Public Databases
Drosophila sequences from GenBank (minus BDGP, EDGP, and dbEST sequences) 12-Jul-2004 na_gb.dmel na_gb.dmel.Z
Drosophila dbEST sequences including BDGP from same strain as genomic sequence 10-Jul-2004 na_dbEST.same.dmel na_dbEST.same.dmel.Z
Drosophila dbEST sequences including BDGP from different strain from genomic sequence 10-Jul-2004 na_dbEST.diff.dmel na_dbEST.diff.dmel.Z
SPTRreal
Drosophila -- Whitfield (November 2003)
Note: in EMBL format, not FASTA format
November 2003 aa_shypo.dmel.embl

README for aa_shypo.dmel.embl

aa_shypo.dmel.embl.Z
Drosophila -- Whitfield (June 2002)
Note: in EMBL format, not FASTA format
June 2002 aa_shypo.dros.embl.06-20-2002

README for aa_shypo.dros.embl.06-20-2002

aa_shypo.dros.embl.06-20-2002.Z
Drosophila -- Whitfield (November 2003)
Note: in EMBL format, not FASTA format
November 2003 aa_sreal.dmel.embl

README for aa_sreal.dmel.embl

aa_sreal.dmel.embl.Z
Drosophila -- Whitfield (June 2002)
Note: in EMBL format, not FASTA format
June 2002 aa_sreal.dros.embl.06-20-2002

README for aa_sreal.dros.embl.06-20-2002

aa_sreal.dros.embl.06-20-2002.Z
Drosophila -- Whitfield (November 2003)
Note: in EMBL format, not FASTA format
November 2003 aa_thypo.dmel.embl

README for aa_thypo.dmel.embl

aa_thypo.dmel.embl.Z
Drosophila -- Whitfield (June 2002)
Note: in EMBL format, not FASTA format
June 2002 aa_thypo.dros.embl.06-20-2002

README for aa_thypo.dros.embl.06-20-2002

aa_thypo.dros.embl.06-20-2002.Z
Drosophila -- Whitfield (November 2003)
Note: in EMBL format, not FASTA format
November 2003 aa_treal.genome.dmel.embl

README for aa_treal.genome.dmel.embl

aa_treal.genome.dmel.embl.Z
Drosophila -- Whitfield (June 2002)
Note: in EMBL format, not FASTA format
June 2002 aa_treal.genome.dros.embl.06-20-2002

README for aa_treal.genome.dros.embl.06-20-2002

aa_treal.genome.dros.embl.06-20-2002.Z
Drosophila -- Whitfield (November 2003)
Note: in EMBL format, not FASTA format
November 2003 aa_treal.real.dmel.embl

README for aa_treal.real.dmel.embl

aa_treal.real.dmel.embl.Z
Drosophila -- Whitfield (June 2002)
Note: in EMBL format, not FASTA format
June 2002 aa_treal.real.dros.embl.06-20-2002

README for aa_treal.real.dros.embl.06-20-2002

aa_treal.real.dros.embl.06-20-2002.Z
Repeats
Drosophila Repetitive sequences -- Ashburner, Benos, & Liao 21-Mar-2002 na_re.dros na_re.dros.Z
Drosophila transposable element sequences Please see Natural Transposable Elements in Release 3 Sequence
Genomic Survey Sequence
Drosophila P element insertion site sequences from BDGP 15-Mar-2002 na_pe.dros na_pe.dros.Z
Drosophila STSs from BDGP and EDGP 21-Mar-2002 na_STS.dros na_STS.dros.Z
Genomic Clones
BDGP/EDGP Genomic Clone Sequence 20-Mar-2003 na_geno_clones.dros na_geno_clones.dros.Z

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