GO:0008152 metabolic process

Cluster 1
GO:0006241 CTP biosynthetic process
GO:0046036 CTP metabolic process
GO:0007307 eggshell chorion gene amplification
GO:0009142 nucleoside triphosphate biosynthetic process
GO:0009141 nucleoside triphosphate metabolic process
GO:0006493 protein amino acid O-linked glycosylation
GO:0009147 pyrimidine nucleoside triphosphate metabolic process
GO:0006221 pyrimidine nucleotide biosynthetic process
GO:0006220 pyrimidine nucleotide metabolic process
GO:0009209 pyrimidine ribonucleoside triphosphate biosynthetic process
GO:0009208 pyrimidine ribonucleoside triphosphate metabolic process
GO:0009220 pyrimidine ribonucleotide biosynthetic process
GO:0009218 pyrimidine ribonucleotide metabolic process
GO:0009201 ribonucleoside triphosphate biosynthetic process
GO:0009199 ribonucleoside triphosphate metabolic process
GO:0006465 signal peptide processing

Cluster 2
GO:0010629 negative regulation of gene expression
GO:0016481 negative regulation of transcription
GO:0045449 regulation of transcription
GO:0006357 regulation of transcription from RNA polymerase II promoter

Cluster 3
GO:0046165 alcohol biosynthetic process
GO:0006094 gluconeogenesis
GO:0006006 glucose metabolic process
GO:0019319 hexose biosynthetic process
GO:0019318 hexose metabolic process
GO:0046364 monosaccharide biosynthetic process
GO:0005996 monosaccharide metabolic process
GO:0007319 negative regulation of oskar mRNA translation
GO:0042026 protein refolding
GO:0006090 pyruvate metabolic process
GO:0046011 regulation of oskar mRNA translation
GO:0042325 regulation of phosphorylation

Cluster 4
GO:0008205 ecdysone metabolic process
GO:0016570 histone modification
GO:0000122 negative regulation of transcription from RNA polymerase II promoter
GO:0051254 positive regulation of RNA metabolic process
GO:0010628 positive regulation of gene expression
GO:0045941 positive regulation of transcription
GO:0045944 positive regulation of transcription from RNA polymerase II promoter
GO:0045893 positive regulation of transcription, DNA-dependent
GO:0006357 regulation of transcription from RNA polymerase II promoter

Cluster 5

Cluster 6
GO:0045944 positive regulation of transcription from RNA polymerase II promoter

Cluster 7
GO:0042180 cellular ketone metabolic process
GO:0006697 ecdysone biosynthetic process
GO:0008205 ecdysone metabolic process
GO:0045456 ecdysteroid biosynthetic process
GO:0045455 ecdysteroid metabolic process
GO:0042446 hormone biosynthetic process
GO:0042181 ketone biosynthetic process
GO:0033674 positive regulation of kinase activity
GO:0045860 positive regulation of protein kinase activity
GO:0006090 pyruvate metabolic process
GO:0042325 regulation of phosphorylation
GO:0006694 steroid biosynthetic process
GO:0016126 sterol biosynthetic process
GO:0016125 sterol metabolic process

Cluster 8
GO:0046165 alcohol biosynthetic process
GO:0034637 cellular carbohydrate biosynthetic process
GO:0006094 gluconeogenesis
GO:0006006 glucose metabolic process
GO:0019319 hexose biosynthetic process
GO:0019318 hexose metabolic process
GO:0032787 monocarboxylic acid metabolic process
GO:0046364 monosaccharide biosynthetic process
GO:0006090 pyruvate metabolic process

Cluster 9
GO:0010628 positive regulation of gene expression
GO:0010557 positive regulation of macromolecule biosynthetic process
GO:0045935 positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process
GO:0045941 positive regulation of transcription

Cluster 10
GO:0032774 RNA biosynthetic process
GO:0016070 RNA metabolic process
GO:0043284 biopolymer biosynthetic process
GO:0043283 biopolymer metabolic process
GO:0009058 biosynthetic process
GO:0034961 cellular biopolymer biosynthetic process
GO:0034960 cellular biopolymer metabolic process
GO:0044249 cellular biosynthetic process
GO:0034645 cellular macromolecule biosynthetic process
GO:0044260 cellular macromolecule metabolic process
GO:0044237 cellular metabolic process
GO:0010467 gene expression
GO:0009059 macromolecule biosynthetic process
GO:0043170 macromolecule metabolic process
GO:0008152 metabolic process
GO:0006139 nucleobase, nucleoside, nucleotide and nucleic acid metabolic process
GO:0044238 primary metabolic process
GO:0051252 regulation of RNA metabolic process
GO:0009889 regulation of biosynthetic process
GO:0031326 regulation of cellular biosynthetic process
GO:0031323 regulation of cellular metabolic process
GO:0010468 regulation of gene expression
GO:0010556 regulation of macromolecule biosynthetic process
GO:0060255 regulation of macromolecule metabolic process
GO:0019222 regulation of metabolic process
GO:0019219 regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process
GO:0045449 regulation of transcription
GO:0006357 regulation of transcription from RNA polymerase II promoter
GO:0006355 regulation of transcription, DNA-dependent
GO:0006350 transcription
GO:0006366 transcription from RNA polymerase II promoter
GO:0006351 transcription, DNA-dependent

Cluster 11

Cluster 12

Cluster 13
GO:0006277 DNA amplification
GO:0043414 biopolymer methylation
GO:0016571 histone methylation
GO:0032259 methylation
GO:0051254 positive regulation of RNA metabolic process
GO:0010628 positive regulation of gene expression
GO:0010604 positive regulation of macromolecule metabolic process
GO:0045935 positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process
GO:0045941 positive regulation of transcription
GO:0045893 positive regulation of transcription, DNA-dependent
GO:0008213 protein amino acid alkylation
GO:0006479 protein amino acid methylation
GO:0016072 rRNA metabolic process

Cluster 14
GO:0051254 positive regulation of RNA metabolic process
GO:0009891 positive regulation of biosynthetic process
GO:0031328 positive regulation of cellular biosynthetic process
GO:0031325 positive regulation of cellular metabolic process
GO:0010628 positive regulation of gene expression
GO:0010557 positive regulation of macromolecule biosynthetic process
GO:0010604 positive regulation of macromolecule metabolic process
GO:0009893 positive regulation of metabolic process
GO:0045935 positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process
GO:0045941 positive regulation of transcription
GO:0045944 positive regulation of transcription from RNA polymerase II promoter
GO:0045893 positive regulation of transcription, DNA-dependent
GO:0006357 regulation of transcription from RNA polymerase II promoter

Cluster 15
GO:0051254 positive regulation of RNA metabolic process
GO:0010628 positive regulation of gene expression
GO:0010557 positive regulation of macromolecule biosynthetic process
GO:0010604 positive regulation of macromolecule metabolic process
GO:0045935 positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process
GO:0045941 positive regulation of transcription
GO:0045893 positive regulation of transcription, DNA-dependent
GO:0043484 regulation of RNA splicing
GO:0050684 regulation of mRNA processing
GO:0048024 regulation of nuclear mRNA splicing, via spliceosome

Cluster 16
GO:0046164 alcohol catabolic process
GO:0006007 glucose catabolic process
GO:0006006 glucose metabolic process
GO:0019320 hexose catabolic process
GO:0046365 monosaccharide catabolic process

Cluster 17
GO:0045944 positive regulation of transcription from RNA polymerase II promoter
GO:0032446 protein modification by small protein conjugation
GO:0016567 protein ubiquitination

Cluster 18
GO:0006308 DNA catabolic process
GO:0006066 cellular alcohol metabolic process
GO:0044242 cellular lipid catabolic process
GO:0042445 hormone metabolic process
GO:0016042 lipid catabolic process

Cluster 19
GO:0006277 DNA amplification
GO:0006260 DNA replication
GO:0006261 DNA-dependent DNA replication
GO:0009310 amine catabolic process
GO:0007307 eggshell chorion gene amplification
GO:0044270 nitrogen compound catabolic process

Cluster 20
GO:0046165 alcohol biosynthetic process
GO:0008652 amino acid biosynthetic process
GO:0006066 cellular alcohol metabolic process
GO:0006697 ecdysone biosynthetic process
GO:0006094 gluconeogenesis
GO:0006006 glucose metabolic process
GO:0006536 glutamate metabolic process
GO:0009084 glutamine family amino acid biosynthetic process
GO:0019319 hexose biosynthetic process
GO:0019318 hexose metabolic process
GO:0046364 monosaccharide biosynthetic process
GO:0005996 monosaccharide metabolic process
GO:0007319 negative regulation of oskar mRNA translation
GO:0045213 neurotransmitter receptor metabolic process
GO:0006267 pre-replicative complex assembly
GO:0006090 pyruvate metabolic process
GO:0043112 receptor metabolic process
GO:0046011 regulation of oskar mRNA translation
GO:0016126 sterol biosynthetic process

Cluster 21

Cluster 22

Cluster 23
GO:0000122 negative regulation of transcription from RNA polymerase II promoter

Cluster 24

Cluster 25

Cluster 26
GO:0006457 protein folding

Cluster 27
GO:0051254 positive regulation of RNA metabolic process
GO:0010628 positive regulation of gene expression
GO:0045935 positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process
GO:0045941 positive regulation of transcription
GO:0045944 positive regulation of transcription from RNA polymerase II promoter
GO:0045893 positive regulation of transcription, DNA-dependent
GO:0006357 regulation of transcription from RNA polymerase II promoter

Cluster 28
GO:0009891 positive regulation of biosynthetic process
GO:0031328 positive regulation of cellular biosynthetic process
GO:0010628 positive regulation of gene expression
GO:0010557 positive regulation of macromolecule biosynthetic process
GO:0010604 positive regulation of macromolecule metabolic process
GO:0045935 positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process
GO:0045941 positive regulation of transcription

Cluster 29
GO:0006564 L-serine biosynthetic process
GO:0006563 L-serine metabolic process
GO:0046395 carboxylic acid catabolic process
GO:0044242 cellular lipid catabolic process
GO:0006635 fatty acid beta-oxidation
GO:0009062 fatty acid catabolic process
GO:0019395 fatty acid oxidation
GO:0016042 lipid catabolic process
GO:0034440 lipid oxidation
GO:0001676 long-chain fatty acid metabolic process
GO:0016054 organic acid catabolic process
GO:0006090 pyruvate metabolic process
GO:0046011 regulation of oskar mRNA translation
GO:0009069 serine family amino acid metabolic process

Cluster 30

Cluster 31
GO:0006914 autophagy
GO:0051604 protein maturation
GO:0051605 protein maturation via proteolysis
GO:0032446 protein modification by small protein conjugation
GO:0016567 protein ubiquitination

Cluster 32

Cluster 33
GO:0046395 carboxylic acid catabolic process
GO:0009062 fatty acid catabolic process
GO:0008156 negative regulation of DNA replication
GO:0016054 organic acid catabolic process
GO:0051254 positive regulation of RNA metabolic process
GO:0045944 positive regulation of transcription from RNA polymerase II promoter
GO:0045893 positive regulation of transcription, DNA-dependent
GO:0035065 regulation of histone acetylation

Cluster 34
GO:0032583 regulation of gene-specific transcription
GO:0042325 regulation of phosphorylation

Cluster 35
GO:0007319 negative regulation of oskar mRNA translation
GO:0017148 negative regulation of translation
GO:0043193 positive regulation of gene-specific transcription
GO:0010552 positive regulation of specific transcription from RNA polymerase II promoter
GO:0042325 regulation of phosphorylation
GO:0010551 regulation of specific transcription from RNA polymerase II promoter
GO:0032569 specific transcription from RNA polymerase II promoter

Cluster 36
GO:0046165 alcohol biosynthetic process
GO:0016051 carbohydrate biosynthetic process
GO:0034637 cellular carbohydrate biosynthetic process
GO:0006094 gluconeogenesis
GO:0006006 glucose metabolic process
GO:0019319 hexose biosynthetic process
GO:0019318 hexose metabolic process
GO:0032787 monocarboxylic acid metabolic process
GO:0046364 monosaccharide biosynthetic process
GO:0005996 monosaccharide metabolic process
GO:0000122 negative regulation of transcription from RNA polymerase II promoter
GO:0006090 pyruvate metabolic process
GO:0006357 regulation of transcription from RNA polymerase II promoter
GO:0006366 transcription from RNA polymerase II promoter

Cluster 37
GO:0006357 regulation of transcription from RNA polymerase II promoter

Cluster 38
GO:0032446 protein modification by small protein conjugation
GO:0016567 protein ubiquitination
GO:0032583 regulation of gene-specific transcription
GO:0010551 regulation of specific transcription from RNA polymerase II promoter
GO:0032569 specific transcription from RNA polymerase II promoter

Cluster 39
GO:0051254 positive regulation of RNA metabolic process
GO:0010628 positive regulation of gene expression
GO:0010557 positive regulation of macromolecule biosynthetic process
GO:0010604 positive regulation of macromolecule metabolic process
GO:0045935 positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process
GO:0045941 positive regulation of transcription
GO:0045944 positive regulation of transcription from RNA polymerase II promoter
GO:0045893 positive regulation of transcription, DNA-dependent
GO:0032446 protein modification by small protein conjugation
GO:0016567 protein ubiquitination

GO:0007166 cell surface receptor linked signal transduction

Cluster 1

Cluster 2

Cluster 3

Cluster 4

Cluster 5

Cluster 6
GO:0007219 Notch signaling pathway
GO:0008101 decapentaplegic receptor signaling pathway

Cluster 7
GO:0008101 decapentaplegic receptor signaling pathway
GO:0045746 negative regulation of Notch signaling pathway

Cluster 8

Cluster 9

Cluster 10

Cluster 11
GO:0042058 regulation of epidermal growth factor receptor signaling pathway
GO:0007169 transmembrane receptor protein tyrosine kinase signaling pathway

Cluster 12
GO:0008293 torso signaling pathway
GO:0007179 transforming growth factor beta receptor signaling pathway
GO:0007178 transmembrane receptor protein serine/threonine kinase signaling pathway

Cluster 13
GO:0008543 fibroblast growth factor receptor signaling pathway
GO:0008593 regulation of Notch signaling pathway

Cluster 14
GO:0008543 fibroblast growth factor receptor signaling pathway

Cluster 15

Cluster 16

Cluster 17
GO:0045747 positive regulation of Notch signaling pathway
GO:0008593 regulation of Notch signaling pathway

Cluster 18

Cluster 19
GO:0030509 BMP signaling pathway
GO:0016055 Wnt receptor signaling pathway
GO:0007167 enzyme linked receptor protein signaling pathway
GO:0030512 negative regulation of transforming growth factor beta receptor signaling pathway
GO:0030510 regulation of BMP signaling pathway
GO:0017015 regulation of transforming growth factor beta receptor signaling pathway
GO:0007179 transforming growth factor beta receptor signaling pathway
GO:0007178 transmembrane receptor protein serine/threonine kinase signaling pathway

Cluster 20

Cluster 21

Cluster 22

Cluster 23
GO:0030509 BMP signaling pathway
GO:0008063 Toll signaling pathway
GO:0030510 regulation of BMP signaling pathway
GO:0017015 regulation of transforming growth factor beta receptor signaling pathway
GO:0008293 torso signaling pathway
GO:0007179 transforming growth factor beta receptor signaling pathway
GO:0007178 transmembrane receptor protein serine/threonine kinase signaling pathway

Cluster 24

Cluster 25

Cluster 26

Cluster 27

Cluster 28

Cluster 29

Cluster 30

Cluster 31

Cluster 32

Cluster 33

Cluster 34
GO:0045746 negative regulation of Notch signaling pathway

Cluster 35
GO:0042058 regulation of epidermal growth factor receptor signaling pathway

Cluster 36

Cluster 37
GO:0007167 enzyme linked receptor protein signaling pathway
GO:0007169 transmembrane receptor protein tyrosine kinase signaling pathway

Cluster 38
GO:0007219 Notch signaling pathway
GO:0008593 regulation of Notch signaling pathway

Cluster 39
GO:0008593 regulation of Notch signaling pathway

GO:0008219 cell death

Cluster 1
GO:0045476 nurse cell apoptosis
GO:0045477 regulation of nurse cell apoptosis

Cluster 2

Cluster 3
GO:0008630 DNA damage response, signal transduction resulting in induction of apoptosis
GO:0006919 caspase activation
GO:0006917 induction of apoptosis
GO:0008629 induction of apoptosis by intracellular signals
GO:0043065 positive regulation of apoptosis
GO:0043280 positive regulation of caspase activity
GO:0043068 positive regulation of programmed cell death

Cluster 4

Cluster 5

Cluster 6
GO:0046667 compound eye retinal cell programmed cell death
GO:0043068 positive regulation of programmed cell death
GO:0046669 regulation of compound eye retinal cell programmed cell death
GO:0046668 regulation of retinal cell programmed cell death

Cluster 7
GO:0006917 induction of apoptosis
GO:0012502 induction of programmed cell death
GO:0043065 positive regulation of apoptosis
GO:0043068 positive regulation of programmed cell death

Cluster 8

Cluster 9

Cluster 10

Cluster 11

Cluster 12

Cluster 13

Cluster 14

Cluster 15
GO:0012502 induction of programmed cell death

Cluster 16

Cluster 17
GO:0046667 compound eye retinal cell programmed cell death
GO:0035072 ecdysone-mediated induction of salivary gland cell autophagic cell death
GO:0012502 induction of programmed cell death
GO:0035078 induction of programmed cell death by ecdysone
GO:0035081 induction of programmed cell death by hormones
GO:0045476 nurse cell apoptosis
GO:0046666 retinal cell programmed cell death

Cluster 18

Cluster 19

Cluster 20

Cluster 21

Cluster 22
GO:0043281 regulation of caspase activity

Cluster 23

Cluster 24

Cluster 25

Cluster 26

Cluster 27
GO:0006915 apoptosis
GO:0046667 compound eye retinal cell programmed cell death
GO:0010623 developmental programmed cell death
GO:0006917 induction of apoptosis
GO:0012502 induction of programmed cell death
GO:0043065 positive regulation of apoptosis
GO:0043068 positive regulation of programmed cell death
GO:0042981 regulation of apoptosis
GO:0043067 regulation of programmed cell death
GO:0046666 retinal cell programmed cell death

Cluster 28

Cluster 29

Cluster 30

Cluster 31
GO:0006917 induction of apoptosis
GO:0043065 positive regulation of apoptosis

Cluster 32

Cluster 33

Cluster 34
GO:0008630 DNA damage response, signal transduction resulting in induction of apoptosis
GO:0006919 caspase activation
GO:0006917 induction of apoptosis
GO:0008629 induction of apoptosis by intracellular signals
GO:0012502 induction of programmed cell death
GO:0043065 positive regulation of apoptosis
GO:0043280 positive regulation of caspase activity
GO:0043068 positive regulation of programmed cell death
GO:0043281 regulation of caspase activity

Cluster 35
GO:0006917 induction of apoptosis
GO:0012502 induction of programmed cell death
GO:0043065 positive regulation of apoptosis
GO:0043068 positive regulation of programmed cell death

Cluster 36

Cluster 37

Cluster 38

Cluster 39
GO:0006917 induction of apoptosis
GO:0043065 positive regulation of apoptosis
GO:0043068 positive regulation of programmed cell death
GO:0043281 regulation of caspase activity

GO:0000902 cell morphogenesis

Cluster 1

Cluster 2

Cluster 3

Cluster 4

Cluster 5

Cluster 6
GO:0045450 bicoid mRNA localization
GO:0042067 establishment of ommatidial polarity

Cluster 7

Cluster 8
GO:0007412 axon target recognition

Cluster 9
GO:0042067 establishment of ommatidial polarity

Cluster 10
GO:0000902 cell morphogenesis
GO:0048813 dendrite morphogenesis

Cluster 11
GO:0007314 oocyte anterior/posterior axis specification
GO:0007309 oocyte axis specification
GO:0007308 oocyte construction
GO:0048601 oocyte morphogenesis
GO:0007316 pole plasm RNA localization
GO:0007315 pole plasm assembly
GO:0019094 pole plasm mRNA localization
GO:0007317 regulation of pole plasm oskar mRNA localization

Cluster 12
GO:0007394 dorsal closure, elongation of leading edge cells
GO:0016476 regulation of embryonic cell shape

Cluster 13

Cluster 14

Cluster 15
GO:0030713 ovarian follicle cell stalk formation

Cluster 16

Cluster 17

Cluster 18
GO:0016334 establishment or maintenance of polarity of follicular epithelium

Cluster 19
GO:0035088 establishment or maintenance of apical/basal cell polarity
GO:0045197 establishment or maintenance of epithelial cell apical/basal polarity

Cluster 20
GO:0008103 oocyte microtubule cytoskeleton polarization

Cluster 21

Cluster 22

Cluster 23
GO:0042067 establishment of ommatidial polarity
GO:0007313 maternal specification of dorsal/ventral axis, oocyte, soma encoded
GO:0007309 oocyte axis specification
GO:0007308 oocyte construction
GO:0007310 oocyte dorsal/ventral axis specification
GO:0048601 oocyte morphogenesis

Cluster 24

Cluster 25

Cluster 26

Cluster 27
GO:0042067 establishment of ommatidial polarity
GO:0016318 ommatidial rotation

Cluster 28

Cluster 29
GO:0030011 maintenance of cell polarity
GO:0007318 pole plasm protein localization

Cluster 30

Cluster 31
GO:0007414 axonal defasciculation
GO:0007415 defasciculation of motor neuron axon
GO:0030722 establishment of oocyte nucleus localization involved in oocyte dorsal/ventral axis specification
GO:0007313 maternal specification of dorsal/ventral axis, oocyte, soma encoded
GO:0008045 motor axon guidance
GO:0007312 oocyte nucleus migration during oocyte axis specification

Cluster 32

Cluster 33

Cluster 34

Cluster 35
GO:0045450 bicoid mRNA localization
GO:0030722 establishment of oocyte nucleus localization involved in oocyte dorsal/ventral axis specification
GO:0016325 oocyte microtubule cytoskeleton organization
GO:0008103 oocyte microtubule cytoskeleton polarization
GO:0051663 oocyte nucleus localization involved in oocyte dorsal/ventral axis specification
GO:0007312 oocyte nucleus migration during oocyte axis specification
GO:0008359 regulation of bicoid mRNA localization
GO:0007317 regulation of pole plasm oskar mRNA localization

Cluster 36

Cluster 37
GO:0007309 oocyte axis specification
GO:0007308 oocyte construction
GO:0048601 oocyte morphogenesis

Cluster 38
GO:0007394 dorsal closure, elongation of leading edge cells
GO:0008360 regulation of cell shape
GO:0016476 regulation of embryonic cell shape

Cluster 39
GO:0042067 establishment of ommatidial polarity
GO:0008045 motor axon guidance
GO:0016325 oocyte microtubule cytoskeleton organization

GO:0033036 macromolecule localization

Cluster 1

Cluster 2

Cluster 3

Cluster 4
GO:0008608 attachment of spindle microtubules to kinetochore
GO:0034453 microtubule anchoring
GO:0006611 protein export from nucleus

Cluster 5

Cluster 6
GO:0045450 bicoid mRNA localization

Cluster 7
GO:0045167 asymmetric protein localization during cell fate commitment

Cluster 8

Cluster 9

Cluster 10

Cluster 11
GO:0006403 RNA localization
GO:0008105 asymmetric protein localization
GO:0045167 asymmetric protein localization during cell fate commitment
GO:0008298 intracellular mRNA localization
GO:0007316 pole plasm RNA localization
GO:0019094 pole plasm mRNA localization
GO:0007317 regulation of pole plasm oskar mRNA localization

Cluster 12
GO:0042307 positive regulation of protein import into nucleus
GO:0051222 positive regulation of protein transport
GO:0042993 positive regulation of transcription factor import into nucleus
GO:0042990 regulation of transcription factor import into nucleus
GO:0042991 transcription factor import into nucleus

Cluster 13

Cluster 14

Cluster 15
GO:0045176 apical protein localization

Cluster 16

Cluster 17

Cluster 18
GO:0045176 apical protein localization

Cluster 19

Cluster 20

Cluster 21

Cluster 22

Cluster 23

Cluster 24

Cluster 25

Cluster 26

Cluster 27

Cluster 28

Cluster 29
GO:0007318 pole plasm protein localization

Cluster 30

Cluster 31

Cluster 32

Cluster 33

Cluster 34

Cluster 35
GO:0045176 apical protein localization
GO:0045450 bicoid mRNA localization
GO:0008359 regulation of bicoid mRNA localization
GO:0007317 regulation of pole plasm oskar mRNA localization

Cluster 36

Cluster 37

Cluster 38
GO:0006626 protein targeting to mitochondrion

Cluster 39

GO:0007399 nervous system development

Cluster 1

Cluster 2
GO:0007417 central nervous system development
GO:0001752 compound eye photoreceptor fate commitment
GO:0042706 eye photoreceptor cell fate commitment
GO:0048663 neuron fate commitment
GO:0007422 peripheral nervous system development
GO:0046552 photoreceptor cell fate commitment

Cluster 3
GO:0007400 neuroblast fate determination
GO:0007419 ventral cord development

Cluster 4

Cluster 5
GO:0007420 brain development
GO:0007417 central nervous system development
GO:0014016 neuroblast differentiation
GO:0014017 neuroblast fate commitment
GO:0007400 neuroblast fate determination
GO:0007419 ventral cord development

Cluster 6
GO:0045466 R7 cell differentiation
GO:0007465 R7 cell fate commitment
GO:0001751 compound eye photoreceptor cell differentiation
GO:0001752 compound eye photoreceptor fate commitment
GO:0042706 eye photoreceptor cell fate commitment
GO:0042063 gliogenesis
GO:0014016 neuroblast differentiation
GO:0014017 neuroblast fate commitment
GO:0007400 neuroblast fate determination
GO:0048663 neuron fate commitment
GO:0007422 peripheral nervous system development
GO:0046552 photoreceptor cell fate commitment
GO:0051960 regulation of nervous system development
GO:0008582 regulation of synaptic growth at neuromuscular junction
GO:0051963 regulation of synaptogenesis
GO:0007416 synaptogenesis
GO:0007419 ventral cord development

Cluster 7
GO:0014045 establishment of blood-brain barrier
GO:0007419 ventral cord development

Cluster 8
GO:0007412 axon target recognition
GO:0014016 neuroblast differentiation
GO:0014017 neuroblast fate commitment
GO:0007400 neuroblast fate determination

Cluster 9
GO:0007417 central nervous system development

Cluster 10
GO:0007417 central nervous system development
GO:0016358 dendrite development
GO:0048813 dendrite morphogenesis
GO:0048699 generation of neurons
GO:0007399 nervous system development
GO:0014016 neuroblast differentiation
GO:0014017 neuroblast fate commitment
GO:0022008 neurogenesis

Cluster 11
GO:0055059 asymmetric neuroblast division
GO:0001751 compound eye photoreceptor cell differentiation
GO:0001754 eye photoreceptor cell differentiation
GO:0014016 neuroblast differentiation
GO:0055057 neuroblast division
GO:0014017 neuroblast fate commitment
GO:0007400 neuroblast fate determination
GO:0007405 neuroblast proliferation
GO:0007422 peripheral nervous system development
GO:0046530 photoreceptor cell differentiation

Cluster 12
GO:0007419 ventral cord development

Cluster 13
GO:0007422 peripheral nervous system development

Cluster 14
GO:0055059 asymmetric neuroblast division
GO:0055057 neuroblast division
GO:0007405 neuroblast proliferation
GO:0007422 peripheral nervous system development
GO:0007419 ventral cord development

Cluster 15
GO:0007422 peripheral nervous system development
GO:0007419 ventral cord development

Cluster 16

Cluster 17

Cluster 18

Cluster 19
GO:0007422 peripheral nervous system development
GO:0007419 ventral cord development

Cluster 20
GO:0051962 positive regulation of nervous system development
GO:0045887 positive regulation of synaptic growth at neuromuscular junction
GO:0051965 positive regulation of synaptogenesis

Cluster 21

Cluster 22
GO:0045467 R7 cell development
GO:0045466 R7 cell differentiation
GO:0007465 R7 cell fate commitment
GO:0014016 neuroblast differentiation
GO:0014017 neuroblast fate commitment
GO:0007400 neuroblast fate determination
GO:0007419 ventral cord development

Cluster 23
GO:0007417 central nervous system development
GO:0007419 ventral cord development

Cluster 24

Cluster 25

Cluster 26

Cluster 27
GO:0007465 R7 cell fate commitment
GO:0007417 central nervous system development
GO:0001752 compound eye photoreceptor fate commitment
GO:0042706 eye photoreceptor cell fate commitment
GO:0008347 glial cell migration
GO:0048663 neuron fate commitment
GO:0046552 photoreceptor cell fate commitment
GO:0007419 ventral cord development

Cluster 28

Cluster 29

Cluster 30

Cluster 31
GO:0007414 axonal defasciculation
GO:0007415 defasciculation of motor neuron axon
GO:0008045 motor axon guidance

Cluster 32

Cluster 33
GO:0007419 ventral cord development

Cluster 34
GO:0010001 glial cell differentiation

Cluster 35
GO:0035193 larval central nervous system remodeling
GO:0014016 neuroblast differentiation
GO:0014017 neuroblast fate commitment
GO:0007400 neuroblast fate determination

Cluster 36
GO:0007417 central nervous system development

Cluster 37

Cluster 38

Cluster 39
GO:0055059 asymmetric neuroblast division
GO:0008347 glial cell migration
GO:0042063 gliogenesis
GO:0008045 motor axon guidance
GO:0014016 neuroblast differentiation
GO:0055057 neuroblast division
GO:0014017 neuroblast fate commitment
GO:0007400 neuroblast fate determination
GO:0007405 neuroblast proliferation
GO:0007419 ventral cord development

GO:0007049 cell cycle

Cluster 1

Cluster 2

Cluster 3

Cluster 4
GO:0000086 G2/M transition of mitotic cell cycle
GO:0051325 interphase
GO:0051329 interphase of mitotic cell cycle

Cluster 5
GO:0007098 centrosome cycle
GO:0051299 centrosome separation
GO:0051726 regulation of cell cycle
GO:0051225 spindle assembly

Cluster 6

Cluster 7
GO:0010458 exit from mitosis
GO:0007096 regulation of exit from mitosis
GO:0007088 regulation of mitosis

Cluster 8

Cluster 9

Cluster 10

Cluster 11

Cluster 12
GO:0010564 regulation of cell cycle process
GO:0007088 regulation of mitosis

Cluster 13
GO:0051325 interphase
GO:0051329 interphase of mitotic cell cycle

Cluster 14

Cluster 15

Cluster 16

Cluster 17

Cluster 18

Cluster 19

Cluster 20

Cluster 21

Cluster 22
GO:0000086 G2/M transition of mitotic cell cycle
GO:0007098 centrosome cycle
GO:0051298 centrosome duplication

Cluster 23

Cluster 24

Cluster 25

Cluster 26
GO:0007062 sister chromatid cohesion

Cluster 27

Cluster 28
GO:0007088 regulation of mitosis

Cluster 29
GO:0051299 centrosome separation
GO:0007076 mitotic chromosome condensation

Cluster 30

Cluster 31

Cluster 32

Cluster 33

Cluster 34
GO:0010458 exit from mitosis
GO:0010564 regulation of cell cycle process
GO:0007096 regulation of exit from mitosis
GO:0007088 regulation of mitosis

Cluster 35

Cluster 36

Cluster 37

Cluster 38

Cluster 39
GO:0051298 centrosome duplication

GO:0030154 cell differentiation

Cluster 1
GO:0042676 compound eye cone cell fate commitment
GO:0007307 eggshell chorion gene amplification
GO:0048135 female germ-line cyst formation

Cluster 2
GO:0045165 cell fate commitment
GO:0001752 compound eye photoreceptor fate commitment
GO:0042706 eye photoreceptor cell fate commitment
GO:0048663 neuron fate commitment
GO:0046552 photoreceptor cell fate commitment

Cluster 3
GO:0035051 cardiac cell differentiation
GO:0007402 ganglion mother cell fate determination
GO:0048333 mesodermal cell differentiation
GO:0001710 mesodermal cell fate commitment
GO:0007500 mesodermal cell fate determination
GO:0007400 neuroblast fate determination
GO:0007513 pericardial cell differentiation
GO:0010453 regulation of cell fate commitment
GO:0042659 regulation of cell fate specification
GO:0048865 stem cell fate commitment
GO:0048867 stem cell fate determination

Cluster 4
GO:0007402 ganglion mother cell fate determination
GO:0048333 mesodermal cell differentiation
GO:0001710 mesodermal cell fate commitment
GO:0007500 mesodermal cell fate determination
GO:0007501 mesodermal cell fate specification
GO:0007513 pericardial cell differentiation
GO:0048867 stem cell fate determination

Cluster 5
GO:0001709 cell fate determination
GO:0001708 cell fate specification
GO:0014016 neuroblast differentiation
GO:0014017 neuroblast fate commitment
GO:0007400 neuroblast fate determination
GO:0010453 regulation of cell fate commitment
GO:0042659 regulation of cell fate specification
GO:0048863 stem cell differentiation
GO:0048865 stem cell fate commitment
GO:0048867 stem cell fate determination

Cluster 6
GO:0045466 R7 cell differentiation
GO:0007465 R7 cell fate commitment
GO:0045450 bicoid mRNA localization
GO:0035051 cardiac cell differentiation
GO:0001709 cell fate determination
GO:0001708 cell fate specification
GO:0042675 compound eye cone cell differentiation
GO:0042676 compound eye cone cell fate commitment
GO:0001751 compound eye photoreceptor cell differentiation
GO:0001752 compound eye photoreceptor fate commitment
GO:0046667 compound eye retinal cell programmed cell death
GO:0042706 eye photoreceptor cell fate commitment
GO:0007402 ganglion mother cell fate determination
GO:0042063 gliogenesis
GO:0045596 negative regulation of cell differentiation
GO:0010454 negative regulation of cell fate commitment
GO:0009996 negative regulation of cell fate specification
GO:0014016 neuroblast differentiation
GO:0014017 neuroblast fate commitment
GO:0007400 neuroblast fate determination
GO:0048663 neuron fate commitment
GO:0007513 pericardial cell differentiation
GO:0046552 photoreceptor cell fate commitment
GO:0060284 regulation of cell development
GO:0045595 regulation of cell differentiation
GO:0010453 regulation of cell fate commitment
GO:0042659 regulation of cell fate specification
GO:0046669 regulation of compound eye retinal cell programmed cell death
GO:0046668 regulation of retinal cell programmed cell death
GO:0048742 regulation of skeletal muscle fiber development
GO:0008582 regulation of synaptic growth at neuromuscular junction
GO:0016360 sensory organ precursor cell fate determination
GO:0048863 stem cell differentiation
GO:0048865 stem cell fate commitment
GO:0048867 stem cell fate determination

Cluster 7
GO:0045167 asymmetric protein localization during cell fate commitment
GO:0035051 cardiac cell differentiation
GO:0001885 endothelial cell development
GO:0045446 endothelial cell differentiation
GO:0014045 establishment of blood-brain barrier
GO:0042693 muscle cell fate commitment
GO:0042694 muscle cell fate specification
GO:0016360 sensory organ precursor cell fate determination
GO:0048865 stem cell fate commitment
GO:0048867 stem cell fate determination

Cluster 8
GO:0007412 axon target recognition
GO:0001708 cell fate specification
GO:0014016 neuroblast differentiation
GO:0014017 neuroblast fate commitment
GO:0007400 neuroblast fate determination
GO:0010453 regulation of cell fate commitment
GO:0042659 regulation of cell fate specification
GO:0048865 stem cell fate commitment
GO:0048867 stem cell fate determination

Cluster 9

Cluster 10
GO:0045165 cell fate commitment
GO:0016358 dendrite development
GO:0048813 dendrite morphogenesis
GO:0048699 generation of neurons
GO:0014016 neuroblast differentiation
GO:0014017 neuroblast fate commitment
GO:0022008 neurogenesis
GO:0048863 stem cell differentiation
GO:0048865 stem cell fate commitment

Cluster 11
GO:0055059 asymmetric neuroblast division
GO:0045167 asymmetric protein localization during cell fate commitment
GO:0046845 branched duct epithelial cell fate determination, open tracheal system
GO:0045165 cell fate commitment
GO:0001709 cell fate determination
GO:0001751 compound eye photoreceptor cell differentiation
GO:0001754 eye photoreceptor cell differentiation
GO:0010454 negative regulation of cell fate commitment
GO:0009996 negative regulation of cell fate specification
GO:0014016 neuroblast differentiation
GO:0055057 neuroblast division
GO:0014017 neuroblast fate commitment
GO:0007400 neuroblast fate determination
GO:0007405 neuroblast proliferation
GO:0007314 oocyte anterior/posterior axis specification
GO:0007309 oocyte axis specification
GO:0007308 oocyte construction
GO:0048599 oocyte development
GO:0048601 oocyte morphogenesis
GO:0046530 photoreceptor cell differentiation
GO:0007316 pole plasm RNA localization
GO:0007315 pole plasm assembly
GO:0019094 pole plasm mRNA localization
GO:0010453 regulation of cell fate commitment
GO:0042659 regulation of cell fate specification
GO:0060281 regulation of oocyte development
GO:0007317 regulation of pole plasm oskar mRNA localization
GO:0048863 stem cell differentiation
GO:0048865 stem cell fate commitment
GO:0048867 stem cell fate determination

Cluster 12
GO:0001708 cell fate specification
GO:0007402 ganglion mother cell fate determination
GO:0010454 negative regulation of cell fate commitment
GO:0009996 negative regulation of cell fate specification
GO:0010453 regulation of cell fate commitment
GO:0042659 regulation of cell fate specification
GO:0048863 stem cell differentiation
GO:0048865 stem cell fate commitment
GO:0048867 stem cell fate determination

Cluster 13
GO:0016360 sensory organ precursor cell fate determination
GO:0048863 stem cell differentiation

Cluster 14
GO:0055059 asymmetric neuroblast division
GO:0035051 cardiac cell differentiation
GO:0010002 cardioblast differentiation
GO:0045165 cell fate commitment
GO:0001709 cell fate determination
GO:0001708 cell fate specification
GO:0030855 epithelial cell differentiation
GO:0048333 mesodermal cell differentiation
GO:0001710 mesodermal cell fate commitment
GO:0007500 mesodermal cell fate determination
GO:0007501 mesodermal cell fate specification
GO:0055057 neuroblast division
GO:0007405 neuroblast proliferation
GO:0007513 pericardial cell differentiation

Cluster 15
GO:0035051 cardiac cell differentiation
GO:0045165 cell fate commitment
GO:0001709 cell fate determination
GO:0001708 cell fate specification
GO:0042675 compound eye cone cell differentiation
GO:0042676 compound eye cone cell fate commitment
GO:0045596 negative regulation of cell differentiation
GO:0010454 negative regulation of cell fate commitment
GO:0009996 negative regulation of cell fate specification
GO:0030713 ovarian follicle cell stalk formation
GO:0010453 regulation of cell fate commitment
GO:0042659 regulation of cell fate specification
GO:0007291 sperm individualization

Cluster 16
GO:0007438 oenocyte development
GO:0001742 oenocyte differentiation

Cluster 17
GO:0045168 cell-cell signaling involved in cell fate commitment
GO:0042675 compound eye cone cell differentiation
GO:0042676 compound eye cone cell fate commitment
GO:0042679 compound eye cone cell fate specification
GO:0046667 compound eye retinal cell programmed cell death
GO:0042688 crystal cell differentiation
GO:0001885 endothelial cell development
GO:0045446 endothelial cell differentiation
GO:0042386 hemocyte differentiation
GO:0046331 lateral inhibition
GO:0010454 negative regulation of cell fate commitment
GO:0009996 negative regulation of cell fate specification
GO:0042683 negative regulation of compound eye cone cell fate specification
GO:0010453 regulation of cell fate commitment
GO:0042659 regulation of cell fate specification
GO:0042682 regulation of compound eye cone cell fate specification
GO:0046666 retinal cell programmed cell death
GO:0016360 sensory organ precursor cell fate determination

Cluster 18

Cluster 19
GO:0046845 branched duct epithelial cell fate determination, open tracheal system
GO:0045165 cell fate commitment
GO:0001709 cell fate determination
GO:0001708 cell fate specification
GO:0007304 chorion-containing eggshell formation
GO:0007307 eggshell chorion gene amplification
GO:0048333 mesodermal cell differentiation
GO:0001710 mesodermal cell fate commitment
GO:0007500 mesodermal cell fate determination
GO:0007501 mesodermal cell fate specification
GO:0048747 muscle fiber development

Cluster 20
GO:0008103 oocyte microtubule cytoskeleton polarization
GO:0007278 pole cell fate determination
GO:0045887 positive regulation of synaptic growth at neuromuscular junction

Cluster 21

Cluster 22
GO:0045467 R7 cell development
GO:0045466 R7 cell differentiation
GO:0007465 R7 cell fate commitment
GO:0007402 ganglion mother cell fate determination
GO:0014016 neuroblast differentiation
GO:0014017 neuroblast fate commitment
GO:0007400 neuroblast fate determination
GO:0048865 stem cell fate commitment
GO:0048867 stem cell fate determination

Cluster 23
GO:0007313 maternal specification of dorsal/ventral axis, oocyte, soma encoded
GO:0007309 oocyte axis specification
GO:0007308 oocyte construction
GO:0048599 oocyte development
GO:0009994 oocyte differentiation
GO:0007310 oocyte dorsal/ventral axis specification
GO:0048601 oocyte morphogenesis

Cluster 24

Cluster 25

Cluster 26

Cluster 27
GO:0007465 R7 cell fate commitment
GO:0035051 cardiac cell differentiation
GO:0001708 cell fate specification
GO:0001752 compound eye photoreceptor fate commitment
GO:0046667 compound eye retinal cell programmed cell death
GO:0010623 developmental programmed cell death
GO:0042706 eye photoreceptor cell fate commitment
GO:0030718 germ-line stem cell maintenance
GO:0008347 glial cell migration
GO:0045596 negative regulation of cell differentiation
GO:0010454 negative regulation of cell fate commitment
GO:0009996 negative regulation of cell fate specification
GO:0048663 neuron fate commitment
GO:0046552 photoreceptor cell fate commitment
GO:0010453 regulation of cell fate commitment
GO:0042659 regulation of cell fate specification
GO:0046666 retinal cell programmed cell death
GO:0019827 stem cell maintenance

Cluster 28
GO:0001709 cell fate determination
GO:0042688 crystal cell differentiation
GO:0007516 hemocyte development
GO:0042386 hemocyte differentiation
GO:0035168 larval lymph gland hemocyte differentiation
GO:0045596 negative regulation of cell differentiation
GO:0042690 negative regulation of crystal cell differentiation
GO:0045611 negative regulation of hemocyte differentiation
GO:0045595 regulation of cell differentiation
GO:0010453 regulation of cell fate commitment
GO:0042659 regulation of cell fate specification
GO:0042689 regulation of crystal cell differentiation
GO:0045610 regulation of hemocyte differentiation

Cluster 29
GO:0007318 pole plasm protein localization

Cluster 30
GO:0035051 cardiac cell differentiation
GO:0030707 ovarian follicle cell development
GO:0007297 ovarian follicle cell migration

Cluster 31
GO:0007414 axonal defasciculation
GO:0007415 defasciculation of motor neuron axon
GO:0030722 establishment of oocyte nucleus localization involved in oocyte dorsal/ventral axis specification
GO:0007402 ganglion mother cell fate determination
GO:0007313 maternal specification of dorsal/ventral axis, oocyte, soma encoded
GO:0008045 motor axon guidance
GO:0007312 oocyte nucleus migration during oocyte axis specification
GO:0010453 regulation of cell fate commitment
GO:0042659 regulation of cell fate specification

Cluster 32

Cluster 33
GO:0045168 cell-cell signaling involved in cell fate commitment
GO:0030381 chorion-containing eggshell pattern formation
GO:0042675 compound eye cone cell differentiation
GO:0042676 compound eye cone cell fate commitment
GO:0042679 compound eye cone cell fate specification
GO:0046843 dorsal appendage formation
GO:0030718 germ-line stem cell maintenance
GO:0046331 lateral inhibition
GO:0010454 negative regulation of cell fate commitment
GO:0009996 negative regulation of cell fate specification
GO:0042683 negative regulation of compound eye cone cell fate specification
GO:0010453 regulation of cell fate commitment
GO:0042659 regulation of cell fate specification
GO:0042682 regulation of compound eye cone cell fate specification
GO:0048867 stem cell fate determination

Cluster 34
GO:0046845 branched duct epithelial cell fate determination, open tracheal system
GO:0035225 determination of genital disc primordium
GO:0007445 determination of imaginal disc primordium
GO:0030855 epithelial cell differentiation
GO:0010001 glial cell differentiation
GO:0048865 stem cell fate commitment
GO:0048867 stem cell fate determination

Cluster 35
GO:0045450 bicoid mRNA localization
GO:0046845 branched duct epithelial cell fate determination, open tracheal system
GO:0035051 cardiac cell differentiation
GO:0035225 determination of genital disc primordium
GO:0007445 determination of imaginal disc primordium
GO:0030722 establishment of oocyte nucleus localization involved in oocyte dorsal/ventral axis specification
GO:0048135 female germ-line cyst formation
GO:0042078 germ-line stem cell division
GO:0030706 germarium-derived oocyte differentiation
GO:0010454 negative regulation of cell fate commitment
GO:0009996 negative regulation of cell fate specification
GO:0014016 neuroblast differentiation
GO:0014017 neuroblast fate commitment
GO:0007400 neuroblast fate determination
GO:0016325 oocyte microtubule cytoskeleton organization
GO:0008103 oocyte microtubule cytoskeleton polarization
GO:0051663 oocyte nucleus localization involved in oocyte dorsal/ventral axis specification
GO:0007312 oocyte nucleus migration during oocyte axis specification
GO:0008359 regulation of bicoid mRNA localization
GO:0010453 regulation of cell fate commitment
GO:0042659 regulation of cell fate specification
GO:0060281 regulation of oocyte development
GO:0007317 regulation of pole plasm oskar mRNA localization
GO:0048865 stem cell fate commitment
GO:0048867 stem cell fate determination

Cluster 36

Cluster 37
GO:0048468 cell development
GO:0030154 cell differentiation
GO:0045165 cell fate commitment
GO:0001709 cell fate determination
GO:0001708 cell fate specification
GO:0048333 mesodermal cell differentiation
GO:0001710 mesodermal cell fate commitment
GO:0007500 mesodermal cell fate determination
GO:0007501 mesodermal cell fate specification
GO:0007309 oocyte axis specification
GO:0007308 oocyte construction
GO:0048599 oocyte development
GO:0009994 oocyte differentiation
GO:0048601 oocyte morphogenesis

Cluster 38
GO:0035051 cardiac cell differentiation
GO:0007297 ovarian follicle cell migration

Cluster 39
GO:0055059 asymmetric neuroblast division
GO:0046845 branched duct epithelial cell fate determination, open tracheal system
GO:0001709 cell fate determination
GO:0001708 cell fate specification
GO:0042675 compound eye cone cell differentiation
GO:0042676 compound eye cone cell fate commitment
GO:0042688 crystal cell differentiation
GO:0007402 ganglion mother cell fate determination
GO:0030718 germ-line stem cell maintenance
GO:0008347 glial cell migration
GO:0042063 gliogenesis
GO:0007516 hemocyte development
GO:0042386 hemocyte differentiation
GO:0048333 mesodermal cell differentiation
GO:0001710 mesodermal cell fate commitment
GO:0007500 mesodermal cell fate determination
GO:0007501 mesodermal cell fate specification
GO:0008045 motor axon guidance
GO:0010454 negative regulation of cell fate commitment
GO:0009996 negative regulation of cell fate specification
GO:0042690 negative regulation of crystal cell differentiation
GO:0045611 negative regulation of hemocyte differentiation
GO:0014016 neuroblast differentiation
GO:0055057 neuroblast division
GO:0014017 neuroblast fate commitment
GO:0007400 neuroblast fate determination
GO:0007405 neuroblast proliferation
GO:0016325 oocyte microtubule cytoskeleton organization
GO:0007513 pericardial cell differentiation
GO:0042387 plasmatocyte differentiation
GO:0010453 regulation of cell fate commitment
GO:0042659 regulation of cell fate specification
GO:0042689 regulation of crystal cell differentiation
GO:0045610 regulation of hemocyte differentiation
GO:0016360 sensory organ precursor cell fate determination
GO:0048865 stem cell fate commitment
GO:0048867 stem cell fate determination
GO:0019827 stem cell maintenance

GO:0007389 pattern specification process

Cluster 1
GO:0048190 wing disc dorsal/ventral pattern formation

Cluster 2
GO:0010160 formation of organ boundary
GO:0007447 imaginal disc pattern formation
GO:0035223 leg disc pattern formation
GO:0007479 leg disc proximal/distal pattern formation
GO:0009954 proximal/distal pattern formation
GO:0007449 proximal/distal pattern formation, imaginal disc
GO:0007432 salivary gland boundary specification

Cluster 3
GO:0009855 determination of bilateral symmetry
GO:0007368 determination of left/right symmetry
GO:0009799 determination of symmetry
GO:0035224 genital disc anterior/posterior pattern formation
GO:0035221 genital disc pattern formation
GO:0007354 zygotic determination of anterior/posterior axis, embryo

Cluster 4
GO:0035285 appendage segmentation
GO:0010160 formation of organ boundary
GO:0016348 imaginal disc-derived leg joint morphogenesis
GO:0035286 leg segmentation
GO:0009954 proximal/distal pattern formation
GO:0007432 salivary gland boundary specification

Cluster 5
GO:0007350 blastoderm segmentation
GO:0009880 embryonic pattern specification
GO:0035287 head segmentation
GO:0007365 periodic partitioning
GO:0035289 posterior head segmentation
GO:0007367 segment polarity determination
GO:0035282 segmentation
GO:0035290 trunk segmentation
GO:0035222 wing disc pattern formation

Cluster 6
GO:0035288 anterior head segmentation
GO:0007448 anterior/posterior pattern formation, imaginal disc
GO:0045450 bicoid mRNA localization
GO:0007350 blastoderm segmentation
GO:0008595 determination of anterior/posterior axis, embryo
GO:0010160 formation of organ boundary
GO:0035287 head segmentation
GO:0007365 periodic partitioning
GO:0035289 posterior head segmentation
GO:0007379 segment specification
GO:0008052 sensory organ boundary specification
GO:0016360 sensory organ precursor cell fate determination
GO:0007380 specification of segmental identity, head
GO:0007351 tripartite regional subdivision
GO:0035290 trunk segmentation
GO:0048100 wing disc anterior/posterior pattern formation

Cluster 7
GO:0010160 formation of organ boundary
GO:0008052 sensory organ boundary specification
GO:0016360 sensory organ precursor cell fate determination

Cluster 8
GO:0007354 zygotic determination of anterior/posterior axis, embryo

Cluster 9
GO:0035282 segmentation

Cluster 10
GO:0007350 blastoderm segmentation
GO:0009880 embryonic pattern specification
GO:0007389 pattern specification process
GO:0007365 periodic partitioning
GO:0007366 periodic partitioning by pair rule gene
GO:0003002 regionalization
GO:0035282 segmentation

Cluster 11
GO:0009948 anterior/posterior axis specification
GO:0009952 anterior/posterior pattern formation
GO:0007350 blastoderm segmentation
GO:0008595 determination of anterior/posterior axis, embryo
GO:0000578 embryonic axis specification
GO:0009880 embryonic pattern specification
GO:0007314 oocyte anterior/posterior axis specification
GO:0007309 oocyte axis specification
GO:0007316 pole plasm RNA localization
GO:0007315 pole plasm assembly
GO:0019094 pole plasm mRNA localization
GO:0007317 regulation of pole plasm oskar mRNA localization
GO:0007379 segment specification
GO:0035282 segmentation
GO:0007351 tripartite regional subdivision

Cluster 12
GO:0008595 determination of anterior/posterior axis, embryo
GO:0007450 dorsal/ventral pattern formation, imaginal disc
GO:0035287 head segmentation
GO:0007447 imaginal disc pattern formation
GO:0035289 posterior head segmentation
GO:0007362 terminal region determination
GO:0007351 tripartite regional subdivision
GO:0007354 zygotic determination of anterior/posterior axis, embryo

Cluster 13
GO:0010160 formation of organ boundary
GO:0009954 proximal/distal pattern formation
GO:0007432 salivary gland boundary specification
GO:0008052 sensory organ boundary specification
GO:0016360 sensory organ precursor cell fate determination

Cluster 14

Cluster 15
GO:0009953 dorsal/ventral pattern formation
GO:0007450 dorsal/ventral pattern formation, imaginal disc
GO:0007447 imaginal disc pattern formation
GO:0007474 imaginal disc-derived wing vein specification

Cluster 16
GO:0035223 leg disc pattern formation
GO:0007479 leg disc proximal/distal pattern formation
GO:0009954 proximal/distal pattern formation
GO:0007449 proximal/distal pattern formation, imaginal disc
GO:0007432 salivary gland boundary specification

Cluster 17
GO:0007450 dorsal/ventral pattern formation, imaginal disc
GO:0008052 sensory organ boundary specification
GO:0016360 sensory organ precursor cell fate determination

Cluster 18
GO:0009953 dorsal/ventral pattern formation
GO:0007450 dorsal/ventral pattern formation, imaginal disc
GO:0007447 imaginal disc pattern formation

Cluster 19
GO:0009950 dorsal/ventral axis specification
GO:0009953 dorsal/ventral pattern formation
GO:0010160 formation of organ boundary
GO:0007447 imaginal disc pattern formation
GO:0007474 imaginal disc-derived wing vein specification
GO:0009954 proximal/distal pattern formation
GO:0007449 proximal/distal pattern formation, imaginal disc
GO:0007432 salivary gland boundary specification

Cluster 20
GO:0008103 oocyte microtubule cytoskeleton polarization
GO:0007432 salivary gland boundary specification

Cluster 21

Cluster 22
GO:0035288 anterior head segmentation
GO:0035287 head segmentation
GO:0035289 posterior head segmentation
GO:0008052 sensory organ boundary specification
GO:0007380 specification of segmental identity, head

Cluster 23
GO:0009948 anterior/posterior axis specification
GO:0009952 anterior/posterior pattern formation
GO:0009798 axis specification
GO:0007350 blastoderm segmentation
GO:0008595 determination of anterior/posterior axis, embryo
GO:0009950 dorsal/ventral axis specification
GO:0009953 dorsal/ventral pattern formation
GO:0000578 embryonic axis specification
GO:0009880 embryonic pattern specification
GO:0007313 maternal specification of dorsal/ventral axis, oocyte, soma encoded
GO:0007309 oocyte axis specification
GO:0007310 oocyte dorsal/ventral axis specification
GO:0007365 periodic partitioning
GO:0007367 segment polarity determination
GO:0035282 segmentation
GO:0007362 terminal region determination
GO:0007351 tripartite regional subdivision
GO:0007354 zygotic determination of anterior/posterior axis, embryo

Cluster 24

Cluster 25

Cluster 26

Cluster 27
GO:0035288 anterior head segmentation
GO:0007448 anterior/posterior pattern formation, imaginal disc
GO:0035285 appendage segmentation
GO:0007350 blastoderm segmentation
GO:0008595 determination of anterior/posterior axis, embryo
GO:0009953 dorsal/ventral pattern formation
GO:0007450 dorsal/ventral pattern formation, imaginal disc
GO:0000578 embryonic axis specification
GO:0035287 head segmentation
GO:0007447 imaginal disc pattern formation
GO:0007474 imaginal disc-derived wing vein specification
GO:0035111 leg joint morphogenesis
GO:0035286 leg segmentation
GO:0035289 posterior head segmentation
GO:0035282 segmentation
GO:0007380 specification of segmental identity, head
GO:0007351 tripartite regional subdivision
GO:0048100 wing disc anterior/posterior pattern formation
GO:0048190 wing disc dorsal/ventral pattern formation
GO:0035222 wing disc pattern formation

Cluster 28
GO:0035288 anterior head segmentation
GO:0007350 blastoderm segmentation
GO:0009880 embryonic pattern specification
GO:0035287 head segmentation
GO:0007474 imaginal disc-derived wing vein specification
GO:0007365 periodic partitioning
GO:0035289 posterior head segmentation
GO:0007379 segment specification
GO:0035282 segmentation
GO:0007380 specification of segmental identity, head

Cluster 29
GO:0007318 pole plasm protein localization

Cluster 30

Cluster 31
GO:0007450 dorsal/ventral pattern formation, imaginal disc
GO:0030722 establishment of oocyte nucleus localization involved in oocyte dorsal/ventral axis specification
GO:0007313 maternal specification of dorsal/ventral axis, oocyte, soma encoded
GO:0007312 oocyte nucleus migration during oocyte axis specification
GO:0007383 specification of segmental identity, antennal segment

Cluster 32

Cluster 33
GO:0035285 appendage segmentation
GO:0030381 chorion-containing eggshell pattern formation
GO:0007450 dorsal/ventral pattern formation, imaginal disc
GO:0016348 imaginal disc-derived leg joint morphogenesis
GO:0035111 leg joint morphogenesis
GO:0035286 leg segmentation
GO:0007366 periodic partitioning by pair rule gene
GO:0045468 regulation of R8 cell spacing in compound eye
GO:0048190 wing disc dorsal/ventral pattern formation
GO:0035222 wing disc pattern formation

Cluster 34
GO:0035285 appendage segmentation
GO:0016348 imaginal disc-derived leg joint morphogenesis
GO:0035111 leg joint morphogenesis
GO:0035286 leg segmentation
GO:0009954 proximal/distal pattern formation
GO:0007449 proximal/distal pattern formation, imaginal disc

Cluster 35
GO:0045450 bicoid mRNA localization
GO:0007450 dorsal/ventral pattern formation, imaginal disc
GO:0030722 establishment of oocyte nucleus localization involved in oocyte dorsal/ventral axis specification
GO:0016348 imaginal disc-derived leg joint morphogenesis
GO:0008103 oocyte microtubule cytoskeleton polarization
GO:0051663 oocyte nucleus localization involved in oocyte dorsal/ventral axis specification
GO:0007312 oocyte nucleus migration during oocyte axis specification
GO:0008359 regulation of bicoid mRNA localization
GO:0007317 regulation of pole plasm oskar mRNA localization
GO:0007354 zygotic determination of anterior/posterior axis, embryo

Cluster 36
GO:0007354 zygotic determination of anterior/posterior axis, embryo

Cluster 37
GO:0009948 anterior/posterior axis specification
GO:0009798 axis specification
GO:0009950 dorsal/ventral axis specification
GO:0009953 dorsal/ventral pattern formation
GO:0007447 imaginal disc pattern formation
GO:0007474 imaginal disc-derived wing vein specification
GO:0007309 oocyte axis specification
GO:0007389 pattern specification process
GO:0003002 regionalization

Cluster 38
GO:0007450 dorsal/ventral pattern formation, imaginal disc
GO:0007447 imaginal disc pattern formation

Cluster 39
GO:0035288 anterior head segmentation
GO:0035285 appendage segmentation
GO:0010160 formation of organ boundary
GO:0035287 head segmentation
GO:0016348 imaginal disc-derived leg joint morphogenesis
GO:0007474 imaginal disc-derived wing vein specification
GO:0035111 leg joint morphogenesis
GO:0035286 leg segmentation
GO:0035289 posterior head segmentation
GO:0009954 proximal/distal pattern formation
GO:0007449 proximal/distal pattern formation, imaginal disc
GO:0007432 salivary gland boundary specification
GO:0008052 sensory organ boundary specification
GO:0016360 sensory organ precursor cell fate determination
GO:0007380 specification of segmental identity, head

GO:0007010 cytoskeleton organization

Cluster 1

Cluster 2

Cluster 3

Cluster 4
GO:0008608 attachment of spindle microtubules to kinetochore
GO:0034453 microtubule anchoring

Cluster 5
GO:0007098 centrosome cycle
GO:0051297 centrosome organization
GO:0051299 centrosome separation
GO:0031023 microtubule organizing center organization
GO:0051225 spindle assembly

Cluster 6

Cluster 7
GO:0030866 cortical actin cytoskeleton organization
GO:0030865 cortical cytoskeleton organization

Cluster 8

Cluster 9

Cluster 10

Cluster 11

Cluster 12

Cluster 13

Cluster 14

Cluster 15
GO:0007015 actin filament organization

Cluster 16

Cluster 17

Cluster 18

Cluster 19

Cluster 20
GO:0008103 oocyte microtubule cytoskeleton polarization

Cluster 21

Cluster 22
GO:0007098 centrosome cycle
GO:0051298 centrosome duplication
GO:0051297 centrosome organization
GO:0031023 microtubule organizing center organization

Cluster 23

Cluster 24

Cluster 25

Cluster 26

Cluster 27

Cluster 28

Cluster 29
GO:0051299 centrosome separation

Cluster 30

Cluster 31

Cluster 32

Cluster 33

Cluster 34
GO:0051493 regulation of cytoskeleton organization

Cluster 35
GO:0030952 establishment or maintenance of cytoskeleton polarity
GO:0030951 establishment or maintenance of microtubule cytoskeleton polarity
GO:0016325 oocyte microtubule cytoskeleton organization
GO:0008103 oocyte microtubule cytoskeleton polarization

Cluster 36

Cluster 37

Cluster 38

Cluster 39
GO:0051298 centrosome duplication
GO:0030952 establishment or maintenance of cytoskeleton polarity
GO:0030951 establishment or maintenance of microtubule cytoskeleton polarity
GO:0016325 oocyte microtubule cytoskeleton organization

GO:0007164 establishment of tissue polarity

Cluster 1

Cluster 2

Cluster 3

Cluster 4

Cluster 5

Cluster 6
GO:0042067 establishment of ommatidial polarity

Cluster 7

Cluster 8

Cluster 9
GO:0042067 establishment of ommatidial polarity
GO:0001736 establishment of planar polarity
GO:0007164 establishment of tissue polarity

Cluster 10

Cluster 11

Cluster 12

Cluster 13

Cluster 14

Cluster 15

Cluster 16

Cluster 17

Cluster 18

Cluster 19

Cluster 20

Cluster 21

Cluster 22

Cluster 23
GO:0042067 establishment of ommatidial polarity

Cluster 24

Cluster 25

Cluster 26

Cluster 27
GO:0042067 establishment of ommatidial polarity
GO:0001736 establishment of planar polarity
GO:0007164 establishment of tissue polarity
GO:0016318 ommatidial rotation

Cluster 28

Cluster 29

Cluster 30

Cluster 31

Cluster 32

Cluster 33

Cluster 34

Cluster 35

Cluster 36

Cluster 37

Cluster 38

Cluster 39
GO:0042067 establishment of ommatidial polarity

GO:0051641 cellular localization

Cluster 1

Cluster 2

Cluster 3
GO:0019896 axon transport of mitochondrion

Cluster 4
GO:0008608 attachment of spindle microtubules to kinetochore
GO:0034453 microtubule anchoring
GO:0051168 nuclear export
GO:0006611 protein export from nucleus

Cluster 5

Cluster 6
GO:0045450 bicoid mRNA localization

Cluster 7
GO:0016482 cytoplasmic transport
GO:0007303 cytoplasmic transport, nurse cell to oocyte

Cluster 8

Cluster 9

Cluster 10

Cluster 11
GO:0008298 intracellular mRNA localization
GO:0019094 pole plasm mRNA localization
GO:0007317 regulation of pole plasm oskar mRNA localization

Cluster 12
GO:0032388 positive regulation of intracellular transport
GO:0046824 positive regulation of nucleocytoplasmic transport
GO:0042307 positive regulation of protein import into nucleus
GO:0042993 positive regulation of transcription factor import into nucleus
GO:0042990 regulation of transcription factor import into nucleus
GO:0042991 transcription factor import into nucleus

Cluster 13

Cluster 14

Cluster 15

Cluster 16

Cluster 17
GO:0016197 endosome transport
GO:0006890 retrograde vesicle-mediated transport, Golgi to ER

Cluster 18

Cluster 19

Cluster 20

Cluster 21

Cluster 22

Cluster 23

Cluster 24

Cluster 25

Cluster 26

Cluster 27

Cluster 28

Cluster 29
GO:0016482 cytoplasmic transport
GO:0007303 cytoplasmic transport, nurse cell to oocyte
GO:0032456 endocytic recycling
GO:0031887 lipid particle transport along microtubule

Cluster 30
GO:0016482 cytoplasmic transport
GO:0007303 cytoplasmic transport, nurse cell to oocyte

Cluster 31
GO:0030722 establishment of oocyte nucleus localization involved in oocyte dorsal/ventral axis specification
GO:0007312 oocyte nucleus migration during oocyte axis specification
GO:0006892 post-Golgi vesicle-mediated transport

Cluster 32

Cluster 33
GO:0016482 cytoplasmic transport
GO:0007303 cytoplasmic transport, nurse cell to oocyte

Cluster 34

Cluster 35
GO:0045450 bicoid mRNA localization
GO:0030722 establishment of oocyte nucleus localization involved in oocyte dorsal/ventral axis specification
GO:0051663 oocyte nucleus localization involved in oocyte dorsal/ventral axis specification
GO:0007312 oocyte nucleus migration during oocyte axis specification
GO:0008359 regulation of bicoid mRNA localization
GO:0007317 regulation of pole plasm oskar mRNA localization

Cluster 36

Cluster 37

Cluster 38
GO:0006626 protein targeting to mitochondrion

Cluster 39

GO:0051301 cell division

Cluster 1

Cluster 2

Cluster 3

Cluster 4

Cluster 5

Cluster 6
GO:0008356 asymmetric cell division
GO:0017145 stem cell division

Cluster 7
GO:0008356 asymmetric cell division
GO:0045035 sensory organ precursor cell division

Cluster 8

Cluster 9

Cluster 10

Cluster 11
GO:0055059 asymmetric neuroblast division
GO:0055057 neuroblast division
GO:0048103 somatic stem cell division

Cluster 12

Cluster 13
GO:0008356 asymmetric cell division

Cluster 14
GO:0055059 asymmetric neuroblast division
GO:0055057 neuroblast division
GO:0048103 somatic stem cell division

Cluster 15

Cluster 16

Cluster 17

Cluster 18

Cluster 19

Cluster 20

Cluster 21

Cluster 22

Cluster 23

Cluster 24

Cluster 25

Cluster 26

Cluster 27
GO:0008356 asymmetric cell division

Cluster 28

Cluster 29

Cluster 30

Cluster 31

Cluster 32

Cluster 33

Cluster 34

Cluster 35
GO:0008356 asymmetric cell division
GO:0042078 germ-line stem cell division

Cluster 36

Cluster 37
GO:0051301 cell division

Cluster 38

Cluster 39
GO:0008356 asymmetric cell division
GO:0055059 asymmetric neuroblast division
GO:0055057 neuroblast division
GO:0048103 somatic stem cell division

GO:0051674 localization of cell

Cluster 1

Cluster 2

Cluster 3
GO:0042074 cell migration involved in gastrulation
GO:0010631 epithelial cell migration
GO:0007427 epithelial cell migration, open tracheal system
GO:0007509 mesoderm migration
GO:0008078 mesodermal cell migration

Cluster 4
GO:0042074 cell migration involved in gastrulation
GO:0007509 mesoderm migration

Cluster 5

Cluster 6

Cluster 7

Cluster 8
GO:0010631 epithelial cell migration
GO:0007427 epithelial cell migration, open tracheal system

Cluster 9

Cluster 10

Cluster 11

Cluster 12

Cluster 13
GO:0042074 cell migration involved in gastrulation
GO:0007509 mesoderm migration
GO:0008078 mesodermal cell migration

Cluster 14
GO:0016477 cell migration
GO:0042074 cell migration involved in gastrulation
GO:0048870 cell motility
GO:0010631 epithelial cell migration
GO:0007427 epithelial cell migration, open tracheal system
GO:0008354 germ cell migration
GO:0007509 mesoderm migration
GO:0008078 mesodermal cell migration
GO:0007280 pole cell migration

Cluster 15
GO:0030720 oocyte localization during germarium-derived egg chamber formation

Cluster 16

Cluster 17

Cluster 18

Cluster 19

Cluster 20

Cluster 21

Cluster 22

Cluster 23

Cluster 24

Cluster 25

Cluster 26

Cluster 27
GO:0008347 glial cell migration

Cluster 28
GO:0016477 cell migration
GO:0048870 cell motility
GO:0010631 epithelial cell migration
GO:0007427 epithelial cell migration, open tracheal system
GO:0008354 germ cell migration

Cluster 29

Cluster 30
GO:0007297 ovarian follicle cell migration

Cluster 31
GO:0008045 motor axon guidance

Cluster 32

Cluster 33

Cluster 34
GO:0010631 epithelial cell migration
GO:0007427 epithelial cell migration, open tracheal system

Cluster 35

Cluster 36

Cluster 37

Cluster 38
GO:0007297 ovarian follicle cell migration

Cluster 39
GO:0042074 cell migration involved in gastrulation
GO:0010631 epithelial cell migration
GO:0007427 epithelial cell migration, open tracheal system
GO:0008354 germ cell migration
GO:0008347 glial cell migration
GO:0007509 mesoderm migration
GO:0008078 mesodermal cell migration
GO:0008045 motor axon guidance

GO:0048511 rhythmic process

Cluster 1

Cluster 2

Cluster 3

Cluster 4

Cluster 5

Cluster 6
GO:0048511 rhythmic process

Cluster 7

Cluster 8

Cluster 9

Cluster 10

Cluster 11

Cluster 12

Cluster 13

Cluster 14

Cluster 15

Cluster 16

Cluster 17

Cluster 18
GO:0042745 circadian sleep/wake cycle

Cluster 19

Cluster 20

Cluster 21

Cluster 22
GO:0022410 circadian sleep/wake cycle process
GO:0050802 circadian sleep/wake cycle, sleep
GO:0042749 regulation of circadian sleep/wake cycle
GO:0045187 regulation of circadian sleep/wake cycle, sleep

Cluster 23

Cluster 24

Cluster 25

Cluster 26

Cluster 27

Cluster 28

Cluster 29

Cluster 30

Cluster 31

Cluster 32

Cluster 33

Cluster 34

Cluster 35

Cluster 36

Cluster 37

Cluster 38

Cluster 39

GO:0009790 embryonic development

Cluster 1

Cluster 2

Cluster 3
GO:0007443 Malpighian tubule morphogenesis
GO:0007375 anterior midgut invagination
GO:0042074 cell migration involved in gastrulation
GO:0048619 embryonic hindgut morphogenesis
GO:0001706 endoderm formation
GO:0001704 formation of primary germ layer
GO:0001707 mesoderm formation
GO:0007509 mesoderm migration
GO:0048333 mesodermal cell differentiation
GO:0001710 mesodermal cell fate commitment
GO:0007500 mesodermal cell fate determination
GO:0008078 mesodermal cell migration
GO:0007354 zygotic determination of anterior/posterior axis, embryo

Cluster 4
GO:0007443 Malpighian tubule morphogenesis
GO:0007375 anterior midgut invagination
GO:0042074 cell migration involved in gastrulation
GO:0048619 embryonic hindgut morphogenesis
GO:0001704 formation of primary germ layer
GO:0007369 gastrulation
GO:0010004 gastrulation involving germ band extension
GO:0001703 gastrulation with mouth forming first
GO:0007377 germ-band extension
GO:0001707 mesoderm formation
GO:0007509 mesoderm migration
GO:0048333 mesodermal cell differentiation
GO:0001710 mesodermal cell fate commitment
GO:0007500 mesodermal cell fate determination
GO:0007501 mesodermal cell fate specification

Cluster 5
GO:0007350 blastoderm segmentation
GO:0009880 embryonic pattern specification
GO:0035287 head segmentation
GO:0007365 periodic partitioning
GO:0035289 posterior head segmentation
GO:0007367 segment polarity determination
GO:0035290 trunk segmentation

Cluster 6
GO:0035288 anterior head segmentation
GO:0007350 blastoderm segmentation
GO:0008595 determination of anterior/posterior axis, embryo
GO:0035287 head segmentation
GO:0001744 optic lobe placode formation
GO:0001743 optic placode formation
GO:0007365 periodic partitioning
GO:0035289 posterior head segmentation
GO:0007379 segment specification
GO:0007380 specification of segmental identity, head
GO:0007351 tripartite regional subdivision
GO:0035290 trunk segmentation

Cluster 7

Cluster 8
GO:0007443 Malpighian tubule morphogenesis
GO:0048619 embryonic hindgut morphogenesis
GO:0007369 gastrulation
GO:0007354 zygotic determination of anterior/posterior axis, embryo

Cluster 9

Cluster 10
GO:0007350 blastoderm segmentation
GO:0009790 embryonic development
GO:0009880 embryonic pattern specification
GO:0007365 periodic partitioning
GO:0007366 periodic partitioning by pair rule gene

Cluster 11
GO:0007350 blastoderm segmentation
GO:0008595 determination of anterior/posterior axis, embryo
GO:0000578 embryonic axis specification
GO:0009880 embryonic pattern specification
GO:0007379 segment specification
GO:0007351 tripartite regional subdivision

Cluster 12
GO:0007378 amnioserosa formation
GO:0008595 determination of anterior/posterior axis, embryo
GO:0007394 dorsal closure, elongation of leading edge cells
GO:0010004 gastrulation involving germ band extension
GO:0001703 gastrulation with mouth forming first
GO:0007390 germ-band shortening
GO:0035287 head segmentation
GO:0007392 initiation of dorsal closure
GO:0035289 posterior head segmentation
GO:0016476 regulation of embryonic cell shape
GO:0045995 regulation of embryonic development
GO:0007362 terminal region determination
GO:0007351 tripartite regional subdivision
GO:0007354 zygotic determination of anterior/posterior axis, embryo

Cluster 13
GO:0042074 cell migration involved in gastrulation
GO:0007369 gastrulation
GO:0007509 mesoderm migration
GO:0008078 mesodermal cell migration

Cluster 14
GO:0007443 Malpighian tubule morphogenesis
GO:0007375 anterior midgut invagination
GO:0042074 cell migration involved in gastrulation
GO:0048619 embryonic hindgut morphogenesis
GO:0048598 embryonic morphogenesis
GO:0001704 formation of primary germ layer
GO:0007369 gastrulation
GO:0010004 gastrulation involving germ band extension
GO:0001703 gastrulation with mouth forming first
GO:0001707 mesoderm formation
GO:0007509 mesoderm migration
GO:0048333 mesodermal cell differentiation
GO:0001710 mesodermal cell fate commitment
GO:0007500 mesodermal cell fate determination
GO:0007501 mesodermal cell fate specification
GO:0008078 mesodermal cell migration
GO:0016331 morphogenesis of embryonic epithelium
GO:0007370 ventral furrow formation

Cluster 15
GO:0007390 germ-band shortening
GO:0007392 initiation of dorsal closure

Cluster 16

Cluster 17

Cluster 18

Cluster 19
GO:0007443 Malpighian tubule morphogenesis
GO:0007375 anterior midgut invagination
GO:0048619 embryonic hindgut morphogenesis
GO:0048598 embryonic morphogenesis
GO:0001704 formation of primary germ layer
GO:0007369 gastrulation
GO:0010004 gastrulation involving germ band extension
GO:0001703 gastrulation with mouth forming first
GO:0001707 mesoderm formation
GO:0048333 mesodermal cell differentiation
GO:0001710 mesodermal cell fate commitment
GO:0007500 mesodermal cell fate determination
GO:0007501 mesodermal cell fate specification
GO:0016331 morphogenesis of embryonic epithelium
GO:0007370 ventral furrow formation

Cluster 20
GO:0001706 endoderm formation

Cluster 21

Cluster 22
GO:0035288 anterior head segmentation
GO:0035287 head segmentation
GO:0035289 posterior head segmentation
GO:0007380 specification of segmental identity, head

Cluster 23
GO:0007378 amnioserosa formation
GO:0007350 blastoderm segmentation
GO:0008595 determination of anterior/posterior axis, embryo
GO:0000578 embryonic axis specification
GO:0048598 embryonic morphogenesis
GO:0009880 embryonic pattern specification
GO:0007369 gastrulation
GO:0010004 gastrulation involving germ band extension
GO:0001703 gastrulation with mouth forming first
GO:0007365 periodic partitioning
GO:0007367 segment polarity determination
GO:0007362 terminal region determination
GO:0007351 tripartite regional subdivision
GO:0007354 zygotic determination of anterior/posterior axis, embryo

Cluster 24

Cluster 25
GO:0048598 embryonic morphogenesis

Cluster 26

Cluster 27
GO:0035288 anterior head segmentation
GO:0007350 blastoderm segmentation
GO:0008595 determination of anterior/posterior axis, embryo
GO:0000578 embryonic axis specification
GO:0001704 formation of primary germ layer
GO:0007369 gastrulation
GO:0035287 head segmentation
GO:0001707 mesoderm formation
GO:0035289 posterior head segmentation
GO:0007380 specification of segmental identity, head
GO:0007351 tripartite regional subdivision

Cluster 28
GO:0035288 anterior head segmentation
GO:0007350 blastoderm segmentation
GO:0035162 embryonic hemopoiesis
GO:0048568 embryonic organ development
GO:0009880 embryonic pattern specification
GO:0001704 formation of primary germ layer
GO:0007369 gastrulation
GO:0035287 head segmentation
GO:0001707 mesoderm formation
GO:0007365 periodic partitioning
GO:0035289 posterior head segmentation
GO:0007379 segment specification
GO:0007380 specification of segmental identity, head

Cluster 29
GO:0046665 amnioserosa maintenance

Cluster 30

Cluster 31
GO:0007378 amnioserosa formation
GO:0007383 specification of segmental identity, antennal segment

Cluster 32

Cluster 33
GO:0007377 germ-band extension
GO:0007366 periodic partitioning by pair rule gene

Cluster 34

Cluster 35
GO:0007378 amnioserosa formation
GO:0007392 initiation of dorsal closure
GO:0001744 optic lobe placode formation
GO:0001743 optic placode formation
GO:0007354 zygotic determination of anterior/posterior axis, embryo

Cluster 36
GO:0007443 Malpighian tubule morphogenesis
GO:0048619 embryonic hindgut morphogenesis
GO:0048598 embryonic morphogenesis
GO:0001706 endoderm formation
GO:0001704 formation of primary germ layer
GO:0007369 gastrulation
GO:0010004 gastrulation involving germ band extension
GO:0001703 gastrulation with mouth forming first
GO:0008258 head involution
GO:0016331 morphogenesis of embryonic epithelium
GO:0007354 zygotic determination of anterior/posterior axis, embryo

Cluster 37
GO:0007443 Malpighian tubule morphogenesis
GO:0007375 anterior midgut invagination
GO:0048619 embryonic hindgut morphogenesis
GO:0048598 embryonic morphogenesis
GO:0001704 formation of primary germ layer
GO:0007369 gastrulation
GO:0010004 gastrulation involving germ band extension
GO:0001703 gastrulation with mouth forming first
GO:0001707 mesoderm formation
GO:0048333 mesodermal cell differentiation
GO:0001710 mesodermal cell fate commitment
GO:0007500 mesodermal cell fate determination
GO:0007501 mesodermal cell fate specification
GO:0016331 morphogenesis of embryonic epithelium
GO:0007370 ventral furrow formation

Cluster 38
GO:0007394 dorsal closure, elongation of leading edge cells
GO:0007392 initiation of dorsal closure
GO:0016476 regulation of embryonic cell shape
GO:0045995 regulation of embryonic development

Cluster 39
GO:0007443 Malpighian tubule morphogenesis
GO:0035288 anterior head segmentation
GO:0007375 anterior midgut invagination
GO:0042074 cell migration involved in gastrulation
GO:0048619 embryonic hindgut morphogenesis
GO:0001706 endoderm formation
GO:0001704 formation of primary germ layer
GO:0007369 gastrulation
GO:0010004 gastrulation involving germ band extension
GO:0001703 gastrulation with mouth forming first
GO:0035287 head segmentation
GO:0001707 mesoderm formation
GO:0007509 mesoderm migration
GO:0048333 mesodermal cell differentiation
GO:0001710 mesodermal cell fate commitment
GO:0007500 mesodermal cell fate determination
GO:0007501 mesodermal cell fate specification
GO:0008078 mesodermal cell migration
GO:0035289 posterior head segmentation
GO:0007380 specification of segmental identity, head

GO:0048598 embryonic morphogenesis

Cluster 1

Cluster 2

Cluster 3
GO:0007443 Malpighian tubule morphogenesis
GO:0007375 anterior midgut invagination
GO:0042074 cell migration involved in gastrulation
GO:0048619 embryonic hindgut morphogenesis
GO:0001706 endoderm formation
GO:0001704 formation of primary germ layer
GO:0001707 mesoderm formation
GO:0007509 mesoderm migration
GO:0048333 mesodermal cell differentiation
GO:0001710 mesodermal cell fate commitment
GO:0007500 mesodermal cell fate determination
GO:0008078 mesodermal cell migration

Cluster 4
GO:0007443 Malpighian tubule morphogenesis
GO:0007375 anterior midgut invagination
GO:0042074 cell migration involved in gastrulation
GO:0048619 embryonic hindgut morphogenesis
GO:0001704 formation of primary germ layer
GO:0007369 gastrulation
GO:0010004 gastrulation involving germ band extension
GO:0001703 gastrulation with mouth forming first
GO:0007377 germ-band extension
GO:0001707 mesoderm formation
GO:0007509 mesoderm migration
GO:0048333 mesodermal cell differentiation
GO:0001710 mesodermal cell fate commitment
GO:0007500 mesodermal cell fate determination
GO:0007501 mesodermal cell fate specification

Cluster 5

Cluster 6
GO:0001744 optic lobe placode formation
GO:0001743 optic placode formation

Cluster 7

Cluster 8
GO:0007443 Malpighian tubule morphogenesis
GO:0048619 embryonic hindgut morphogenesis
GO:0007369 gastrulation

Cluster 9

Cluster 10

Cluster 11

Cluster 12
GO:0007378 amnioserosa formation
GO:0007394 dorsal closure, elongation of leading edge cells
GO:0010004 gastrulation involving germ band extension
GO:0001703 gastrulation with mouth forming first
GO:0007390 germ-band shortening
GO:0007392 initiation of dorsal closure

Cluster 13
GO:0042074 cell migration involved in gastrulation
GO:0007369 gastrulation
GO:0007509 mesoderm migration
GO:0008078 mesodermal cell migration

Cluster 14
GO:0007443 Malpighian tubule morphogenesis
GO:0007375 anterior midgut invagination
GO:0042074 cell migration involved in gastrulation
GO:0048619 embryonic hindgut morphogenesis
GO:0048598 embryonic morphogenesis
GO:0001704 formation of primary germ layer
GO:0007369 gastrulation
GO:0010004 gastrulation involving germ band extension
GO:0001703 gastrulation with mouth forming first
GO:0001707 mesoderm formation
GO:0007509 mesoderm migration
GO:0048333 mesodermal cell differentiation
GO:0001710 mesodermal cell fate commitment
GO:0007500 mesodermal cell fate determination
GO:0007501 mesodermal cell fate specification
GO:0008078 mesodermal cell migration
GO:0016331 morphogenesis of embryonic epithelium
GO:0007370 ventral furrow formation

Cluster 15
GO:0007390 germ-band shortening
GO:0007392 initiation of dorsal closure

Cluster 16

Cluster 17

Cluster 18

Cluster 19
GO:0007443 Malpighian tubule morphogenesis
GO:0007375 anterior midgut invagination
GO:0048619 embryonic hindgut morphogenesis
GO:0048598 embryonic morphogenesis
GO:0001704 formation of primary germ layer
GO:0007369 gastrulation
GO:0010004 gastrulation involving germ band extension
GO:0001703 gastrulation with mouth forming first
GO:0001707 mesoderm formation
GO:0048333 mesodermal cell differentiation
GO:0001710 mesodermal cell fate commitment
GO:0007500 mesodermal cell fate determination
GO:0007501 mesodermal cell fate specification
GO:0016331 morphogenesis of embryonic epithelium
GO:0007370 ventral furrow formation

Cluster 20
GO:0001706 endoderm formation

Cluster 21

Cluster 22

Cluster 23
GO:0007378 amnioserosa formation
GO:0048598 embryonic morphogenesis
GO:0007369 gastrulation
GO:0010004 gastrulation involving germ band extension
GO:0001703 gastrulation with mouth forming first

Cluster 24

Cluster 25
GO:0048598 embryonic morphogenesis

Cluster 26

Cluster 27
GO:0001704 formation of primary germ layer
GO:0007369 gastrulation
GO:0001707 mesoderm formation

Cluster 28
GO:0001704 formation of primary germ layer
GO:0007369 gastrulation
GO:0001707 mesoderm formation

Cluster 29

Cluster 30

Cluster 31
GO:0007378 amnioserosa formation

Cluster 32

Cluster 33
GO:0007377 germ-band extension

Cluster 34

Cluster 35
GO:0007378 amnioserosa formation
GO:0007392 initiation of dorsal closure
GO:0001744 optic lobe placode formation
GO:0001743 optic placode formation

Cluster 36
GO:0007443 Malpighian tubule morphogenesis
GO:0048619 embryonic hindgut morphogenesis
GO:0048598 embryonic morphogenesis
GO:0001706 endoderm formation
GO:0001704 formation of primary germ layer
GO:0007369 gastrulation
GO:0010004 gastrulation involving germ band extension
GO:0001703 gastrulation with mouth forming first
GO:0008258 head involution
GO:0016331 morphogenesis of embryonic epithelium

Cluster 37
GO:0007443 Malpighian tubule morphogenesis
GO:0007375 anterior midgut invagination
GO:0048619 embryonic hindgut morphogenesis
GO:0048598 embryonic morphogenesis
GO:0001704 formation of primary germ layer
GO:0007369 gastrulation
GO:0010004 gastrulation involving germ band extension
GO:0001703 gastrulation with mouth forming first
GO:0001707 mesoderm formation
GO:0048333 mesodermal cell differentiation
GO:0001710 mesodermal cell fate commitment
GO:0007500 mesodermal cell fate determination
GO:0007501 mesodermal cell fate specification
GO:0016331 morphogenesis of embryonic epithelium
GO:0007370 ventral furrow formation

Cluster 38
GO:0007394 dorsal closure, elongation of leading edge cells
GO:0007392 initiation of dorsal closure

Cluster 39
GO:0007443 Malpighian tubule morphogenesis
GO:0007375 anterior midgut invagination
GO:0042074 cell migration involved in gastrulation
GO:0048619 embryonic hindgut morphogenesis
GO:0001706 endoderm formation
GO:0001704 formation of primary germ layer
GO:0007369 gastrulation
GO:0010004 gastrulation involving germ band extension
GO:0001703 gastrulation with mouth forming first
GO:0001707 mesoderm formation
GO:0007509 mesoderm migration
GO:0048333 mesodermal cell differentiation
GO:0001710 mesodermal cell fate commitment
GO:0007500 mesodermal cell fate determination
GO:0007501 mesodermal cell fate specification
GO:0008078 mesodermal cell migration

GO:0009880 embryonic pattern specification

Cluster 1

Cluster 2

Cluster 3
GO:0007354 zygotic determination of anterior/posterior axis, embryo

Cluster 4

Cluster 5
GO:0007350 blastoderm segmentation
GO:0009880 embryonic pattern specification
GO:0035287 head segmentation
GO:0007365 periodic partitioning
GO:0035289 posterior head segmentation
GO:0007367 segment polarity determination
GO:0035290 trunk segmentation

Cluster 6
GO:0035288 anterior head segmentation
GO:0007350 blastoderm segmentation
GO:0008595 determination of anterior/posterior axis, embryo
GO:0035287 head segmentation
GO:0007365 periodic partitioning
GO:0035289 posterior head segmentation
GO:0007379 segment specification
GO:0007380 specification of segmental identity, head
GO:0007351 tripartite regional subdivision
GO:0035290 trunk segmentation

Cluster 7

Cluster 8
GO:0007354 zygotic determination of anterior/posterior axis, embryo

Cluster 9

Cluster 10
GO:0007350 blastoderm segmentation
GO:0009880 embryonic pattern specification
GO:0007365 periodic partitioning
GO:0007366 periodic partitioning by pair rule gene

Cluster 11
GO:0007350 blastoderm segmentation
GO:0008595 determination of anterior/posterior axis, embryo
GO:0000578 embryonic axis specification
GO:0009880 embryonic pattern specification
GO:0007379 segment specification
GO:0007351 tripartite regional subdivision

Cluster 12
GO:0008595 determination of anterior/posterior axis, embryo
GO:0035287 head segmentation
GO:0035289 posterior head segmentation
GO:0007362 terminal region determination
GO:0007351 tripartite regional subdivision
GO:0007354 zygotic determination of anterior/posterior axis, embryo

Cluster 13

Cluster 14

Cluster 15

Cluster 16

Cluster 17

Cluster 18

Cluster 19

Cluster 20

Cluster 21

Cluster 22
GO:0035288 anterior head segmentation
GO:0035287 head segmentation
GO:0035289 posterior head segmentation
GO:0007380 specification of segmental identity, head

Cluster 23
GO:0007350 blastoderm segmentation
GO:0008595 determination of anterior/posterior axis, embryo
GO:0000578 embryonic axis specification
GO:0009880 embryonic pattern specification
GO:0007365 periodic partitioning
GO:0007367 segment polarity determination
GO:0007362 terminal region determination
GO:0007351 tripartite regional subdivision
GO:0007354 zygotic determination of anterior/posterior axis, embryo

Cluster 24

Cluster 25

Cluster 26

Cluster 27
GO:0035288 anterior head segmentation
GO:0007350 blastoderm segmentation
GO:0008595 determination of anterior/posterior axis, embryo
GO:0000578 embryonic axis specification
GO:0035287 head segmentation
GO:0035289 posterior head segmentation
GO:0007380 specification of segmental identity, head
GO:0007351 tripartite regional subdivision

Cluster 28
GO:0035288 anterior head segmentation
GO:0007350 blastoderm segmentation
GO:0009880 embryonic pattern specification
GO:0035287 head segmentation
GO:0007365 periodic partitioning
GO:0035289 posterior head segmentation
GO:0007379 segment specification
GO:0007380 specification of segmental identity, head

Cluster 29

Cluster 30

Cluster 31
GO:0007383 specification of segmental identity, antennal segment

Cluster 32

Cluster 33
GO:0007366 periodic partitioning by pair rule gene

Cluster 34

Cluster 35
GO:0007354 zygotic determination of anterior/posterior axis, embryo

Cluster 36
GO:0007354 zygotic determination of anterior/posterior axis, embryo

Cluster 37

Cluster 38

Cluster 39
GO:0035288 anterior head segmentation
GO:0035287 head segmentation
GO:0035289 posterior head segmentation
GO:0007380 specification of segmental identity, head

GO:0048513 organ development

Cluster 1
GO:0042676 compound eye cone cell fate commitment
GO:0048190 wing disc dorsal/ventral pattern formation

Cluster 2
GO:0001752 compound eye photoreceptor fate commitment
GO:0042706 eye photoreceptor cell fate commitment
GO:0010160 formation of organ boundary
GO:0048732 gland development
GO:0007444 imaginal disc development
GO:0007560 imaginal disc morphogenesis
GO:0007447 imaginal disc pattern formation
GO:0007476 imaginal disc-derived wing morphogenesis
GO:0008586 imaginal disc-derived wing vein morphogenesis
GO:0035218 leg disc development
GO:0035223 leg disc pattern formation
GO:0007479 leg disc proximal/distal pattern formation
GO:0007517 muscle development
GO:0048645 organ formation
GO:0007449 proximal/distal pattern formation, imaginal disc
GO:0007432 salivary gland boundary specification
GO:0007431 salivary gland development
GO:0014706 striated muscle development
GO:0035220 wing disc development
GO:0007472 wing disc morphogenesis

Cluster 3
GO:0007443 Malpighian tubule morphogenesis
GO:0007487 analia development
GO:0007375 anterior midgut invagination
GO:0035051 cardiac cell differentiation
GO:0007499 ectoderm and mesoderm interaction
GO:0048619 embryonic hindgut morphogenesis
GO:0007492 endoderm development
GO:0001706 endoderm formation
GO:0035224 genital disc anterior/posterior pattern formation
GO:0035215 genital disc development
GO:0035221 genital disc pattern formation
GO:0007523 larval visceral muscle development
GO:0048542 lymph gland development
GO:0001707 mesoderm formation
GO:0007509 mesoderm migration
GO:0048332 mesoderm morphogenesis
GO:0048333 mesodermal cell differentiation
GO:0001710 mesodermal cell fate commitment
GO:0007500 mesodermal cell fate determination
GO:0008078 mesodermal cell migration
GO:0007513 pericardial cell differentiation
GO:0007428 primary branching, open tracheal system
GO:0007419 ventral cord development
GO:0007522 visceral muscle development

Cluster 4
GO:0007443 Malpighian tubule morphogenesis
GO:0007487 analia development
GO:0007375 anterior midgut invagination
GO:0007499 ectoderm and mesoderm interaction
GO:0048619 embryonic hindgut morphogenesis
GO:0010160 formation of organ boundary
GO:0035215 genital disc development
GO:0007506 gonadal mesoderm development
GO:0007482 haltere development
GO:0016348 imaginal disc-derived leg joint morphogenesis
GO:0001707 mesoderm formation
GO:0007509 mesoderm migration
GO:0048332 mesoderm morphogenesis
GO:0048333 mesodermal cell differentiation
GO:0001710 mesodermal cell fate commitment
GO:0007500 mesodermal cell fate determination
GO:0007501 mesodermal cell fate specification
GO:0048645 organ formation
GO:0007513 pericardial cell differentiation
GO:0007432 salivary gland boundary specification
GO:0048729 tissue morphogenesis
GO:0007522 visceral muscle development

Cluster 5
GO:0007420 brain development
GO:0007419 ventral cord development
GO:0035222 wing disc pattern formation

Cluster 6
GO:0055034 Bolwig's organ development
GO:0001746 Bolwig's organ morphogenesis
GO:0045466 R7 cell differentiation
GO:0007465 R7 cell fate commitment
GO:0007448 anterior/posterior pattern formation, imaginal disc
GO:0035051 cardiac cell differentiation
GO:0042675 compound eye cone cell differentiation
GO:0042676 compound eye cone cell fate commitment
GO:0001751 compound eye photoreceptor cell differentiation
GO:0001752 compound eye photoreceptor fate commitment
GO:0046667 compound eye retinal cell programmed cell death
GO:0042067 establishment of ommatidial polarity
GO:0042706 eye photoreceptor cell fate commitment
GO:0035214 eye-antennal disc development
GO:0007455 eye-antennal disc morphogenesis
GO:0010160 formation of organ boundary
GO:0035215 genital disc development
GO:0007507 heart development
GO:0048645 organ formation
GO:0007513 pericardial cell differentiation
GO:0046669 regulation of compound eye retinal cell programmed cell death
GO:0046668 regulation of retinal cell programmed cell death
GO:0048641 regulation of skeletal muscle development
GO:0048742 regulation of skeletal muscle fiber development
GO:0008582 regulation of synaptic growth at neuromuscular junction
GO:0008052 sensory organ boundary specification
GO:0016360 sensory organ precursor cell fate determination
GO:0007419 ventral cord development
GO:0048100 wing disc anterior/posterior pattern formation

Cluster 7
GO:0035051 cardiac cell differentiation
GO:0010160 formation of organ boundary
GO:0048645 organ formation
GO:0007428 primary branching, open tracheal system
GO:0008052 sensory organ boundary specification
GO:0045035 sensory organ precursor cell division
GO:0016360 sensory organ precursor cell fate determination
GO:0007419 ventral cord development

Cluster 8
GO:0007443 Malpighian tubule morphogenesis
GO:0007487 analia development
GO:0048546 digestive tract morphogenesis
GO:0007439 ectodermal gut development
GO:0048567 ectodermal gut morphogenesis
GO:0048619 embryonic hindgut morphogenesis
GO:0035215 genital disc development
GO:0048565 gut development
GO:0048547 gut morphogenesis
GO:0007442 hindgut morphogenesis
GO:0007428 primary branching, open tracheal system

Cluster 9
GO:0042067 establishment of ommatidial polarity
GO:0001736 establishment of planar polarity
GO:0035218 leg disc development
GO:0001738 morphogenesis of a polarized epithelium

Cluster 10
GO:0048565 gut development
GO:0048513 organ development
GO:0009887 organ morphogenesis

Cluster 11
GO:0001751 compound eye photoreceptor cell differentiation
GO:0001754 eye photoreceptor cell differentiation
GO:0007455 eye-antennal disc morphogenesis
GO:0035215 genital disc development
GO:0007498 mesoderm development

Cluster 12
GO:0007394 dorsal closure, elongation of leading edge cells
GO:0007450 dorsal/ventral pattern formation, imaginal disc
GO:0007447 imaginal disc pattern formation
GO:0007392 initiation of dorsal closure
GO:0007419 ventral cord development

Cluster 13
GO:0010160 formation of organ boundary
GO:0007507 heart development
GO:0008587 imaginal disc-derived wing margin morphogenesis
GO:0007498 mesoderm development
GO:0007509 mesoderm migration
GO:0008078 mesodermal cell migration
GO:0048645 organ formation
GO:0007432 salivary gland boundary specification
GO:0008052 sensory organ boundary specification
GO:0016360 sensory organ precursor cell fate determination
GO:0048729 tissue morphogenesis

Cluster 14
GO:0007443 Malpighian tubule morphogenesis
GO:0007469 antennal development
GO:0007375 anterior midgut invagination
GO:0035051 cardiac cell differentiation
GO:0010002 cardioblast differentiation
GO:0048546 digestive tract morphogenesis
GO:0007499 ectoderm and mesoderm interaction
GO:0007439 ectodermal gut development
GO:0048567 ectodermal gut morphogenesis
GO:0048619 embryonic hindgut morphogenesis
GO:0030855 epithelial cell differentiation
GO:0008406 gonad development
GO:0007506 gonadal mesoderm development
GO:0048565 gut development
GO:0048547 gut morphogenesis
GO:0007507 heart development
GO:0007442 hindgut morphogenesis
GO:0048542 lymph gland development
GO:0007498 mesoderm development
GO:0001707 mesoderm formation
GO:0007509 mesoderm migration
GO:0048332 mesoderm morphogenesis
GO:0048333 mesodermal cell differentiation
GO:0001710 mesodermal cell fate commitment
GO:0007500 mesodermal cell fate determination
GO:0007501 mesodermal cell fate specification
GO:0008078 mesodermal cell migration
GO:0002009 morphogenesis of an epithelium
GO:0016331 morphogenesis of embryonic epithelium
GO:0007513 pericardial cell differentiation
GO:0007431 salivary gland development
GO:0007525 somatic muscle development
GO:0009888 tissue development
GO:0048729 tissue morphogenesis
GO:0007419 ventral cord development
GO:0007522 visceral muscle development

Cluster 15
GO:0035051 cardiac cell differentiation
GO:0042675 compound eye cone cell differentiation
GO:0042676 compound eye cone cell fate commitment
GO:0007450 dorsal/ventral pattern formation, imaginal disc
GO:0007398 ectoderm development
GO:0007507 heart development
GO:0030097 hemopoiesis
GO:0048534 hemopoietic or lymphoid organ development
GO:0007447 imaginal disc pattern formation
GO:0008586 imaginal disc-derived wing vein morphogenesis
GO:0007474 imaginal disc-derived wing vein specification
GO:0007392 initiation of dorsal closure
GO:0016333 morphogenesis of follicular epithelium
GO:0007458 progression of morphogenetic furrow during compound eye morphogenesis
GO:0007419 ventral cord development

Cluster 16
GO:0035223 leg disc pattern formation
GO:0007479 leg disc proximal/distal pattern formation
GO:0007449 proximal/distal pattern formation, imaginal disc
GO:0007432 salivary gland boundary specification

Cluster 17
GO:0007469 antennal development
GO:0048800 antennal morphogenesis
GO:0042675 compound eye cone cell differentiation
GO:0042676 compound eye cone cell fate commitment
GO:0042679 compound eye cone cell fate specification
GO:0046667 compound eye retinal cell programmed cell death
GO:0042688 crystal cell differentiation
GO:0007450 dorsal/ventral pattern formation, imaginal disc
GO:0035072 ecdysone-mediated induction of salivary gland cell autophagic cell death
GO:0042386 hemocyte differentiation
GO:0007480 imaginal disc-derived leg morphogenesis
GO:0007478 leg disc morphogenesis
GO:0016333 morphogenesis of follicular epithelium
GO:0042683 negative regulation of compound eye cone cell fate specification
GO:0007458 progression of morphogenetic furrow during compound eye morphogenesis
GO:0042682 regulation of compound eye cone cell fate specification
GO:0046666 retinal cell programmed cell death
GO:0008052 sensory organ boundary specification
GO:0016360 sensory organ precursor cell fate determination

Cluster 18
GO:0007450 dorsal/ventral pattern formation, imaginal disc
GO:0016334 establishment or maintenance of polarity of follicular epithelium
GO:0007447 imaginal disc pattern formation
GO:0016333 morphogenesis of follicular epithelium

Cluster 19
GO:0007443 Malpighian tubule morphogenesis
GO:0007375 anterior midgut invagination
GO:0007499 ectoderm and mesoderm interaction
GO:0048619 embryonic hindgut morphogenesis
GO:0010160 formation of organ boundary
GO:0035215 genital disc development
GO:0048732 gland development
GO:0007507 heart development
GO:0007444 imaginal disc development
GO:0007446 imaginal disc growth
GO:0007560 imaginal disc morphogenesis
GO:0007447 imaginal disc pattern formation
GO:0007476 imaginal disc-derived wing morphogenesis
GO:0008586 imaginal disc-derived wing vein morphogenesis
GO:0007474 imaginal disc-derived wing vein specification
GO:0007498 mesoderm development
GO:0001707 mesoderm formation
GO:0048332 mesoderm morphogenesis
GO:0048333 mesodermal cell differentiation
GO:0001710 mesodermal cell fate commitment
GO:0007500 mesodermal cell fate determination
GO:0007501 mesodermal cell fate specification
GO:0002009 morphogenesis of an epithelium
GO:0016331 morphogenesis of embryonic epithelium
GO:0007517 muscle development
GO:0048747 muscle fiber development
GO:0048645 organ formation
GO:0007449 proximal/distal pattern formation, imaginal disc
GO:0007432 salivary gland boundary specification
GO:0007431 salivary gland development
GO:0007519 skeletal muscle development
GO:0014706 striated muscle development
GO:0048729 tissue morphogenesis
GO:0007419 ventral cord development
GO:0035220 wing disc development
GO:0007472 wing disc morphogenesis

Cluster 20
GO:0007492 endoderm development
GO:0001706 endoderm formation
GO:0035215 genital disc development
GO:0045887 positive regulation of synaptic growth at neuromuscular junction
GO:0048634 regulation of muscle development
GO:0016202 regulation of striated muscle development
GO:0007432 salivary gland boundary specification

Cluster 21

Cluster 22
GO:0045467 R7 cell development
GO:0045466 R7 cell differentiation
GO:0007465 R7 cell fate commitment
GO:0008052 sensory organ boundary specification
GO:0007419 ventral cord development

Cluster 23
GO:0007398 ectoderm development
GO:0042067 establishment of ommatidial polarity
GO:0008586 imaginal disc-derived wing vein morphogenesis
GO:0007498 mesoderm development
GO:0009888 tissue development
GO:0007419 ventral cord development

Cluster 24

Cluster 25

Cluster 26

Cluster 27
GO:0007465 R7 cell fate commitment
GO:0007448 anterior/posterior pattern formation, imaginal disc
GO:0035051 cardiac cell differentiation
GO:0001752 compound eye photoreceptor fate commitment
GO:0046667 compound eye retinal cell programmed cell death
GO:0007450 dorsal/ventral pattern formation, imaginal disc
GO:0007398 ectoderm development
GO:0042067 establishment of ommatidial polarity
GO:0001736 establishment of planar polarity
GO:0042706 eye photoreceptor cell fate commitment
GO:0035214 eye-antennal disc development
GO:0007455 eye-antennal disc morphogenesis
GO:0035215 genital disc development
GO:0007507 heart development
GO:0007447 imaginal disc pattern formation
GO:0007480 imaginal disc-derived leg morphogenesis
GO:0007474 imaginal disc-derived wing vein specification
GO:0035218 leg disc development
GO:0007498 mesoderm development
GO:0001707 mesoderm formation
GO:0048332 mesoderm morphogenesis
GO:0001738 morphogenesis of a polarized epithelium
GO:0016318 ommatidial rotation
GO:0046666 retinal cell programmed cell death
GO:0048729 tissue morphogenesis
GO:0007419 ventral cord development
GO:0048100 wing disc anterior/posterior pattern formation
GO:0048190 wing disc dorsal/ventral pattern formation
GO:0035222 wing disc pattern formation

Cluster 28
GO:0042688 crystal cell differentiation
GO:0035162 embryonic hemopoiesis
GO:0048568 embryonic organ development
GO:0007516 hemocyte development
GO:0042386 hemocyte differentiation
GO:0030097 hemopoiesis
GO:0048534 hemopoietic or lymphoid organ development
GO:0007474 imaginal disc-derived wing vein specification
GO:0035168 larval lymph gland hemocyte differentiation
GO:0035167 larval lymph gland hemopoiesis
GO:0048542 lymph gland development
GO:0001707 mesoderm formation
GO:0048332 mesoderm morphogenesis
GO:0042690 negative regulation of crystal cell differentiation
GO:0045611 negative regulation of hemocyte differentiation
GO:0035166 post-embryonic hemopoiesis
GO:0048569 post-embryonic organ development
GO:0042689 regulation of crystal cell differentiation
GO:0045610 regulation of hemocyte differentiation

Cluster 29

Cluster 30
GO:0035051 cardiac cell differentiation
GO:0007507 heart development

Cluster 31
GO:0007450 dorsal/ventral pattern formation, imaginal disc

Cluster 32

Cluster 33
GO:0042675 compound eye cone cell differentiation
GO:0042676 compound eye cone cell fate commitment
GO:0042679 compound eye cone cell fate specification
GO:0007450 dorsal/ventral pattern formation, imaginal disc
GO:0016348 imaginal disc-derived leg joint morphogenesis
GO:0042683 negative regulation of compound eye cone cell fate specification
GO:0007458 progression of morphogenetic furrow during compound eye morphogenesis
GO:0045468 regulation of R8 cell spacing in compound eye
GO:0042682 regulation of compound eye cone cell fate specification
GO:0007419 ventral cord development
GO:0048190 wing disc dorsal/ventral pattern formation
GO:0035222 wing disc pattern formation

Cluster 34
GO:0048098 antennal joint development
GO:0035225 determination of genital disc primordium
GO:0007445 determination of imaginal disc primordium
GO:0048546 digestive tract morphogenesis
GO:0007439 ectodermal gut development
GO:0048567 ectodermal gut morphogenesis
GO:0030855 epithelial cell differentiation
GO:0007440 foregut morphogenesis
GO:0035215 genital disc development
GO:0048547 gut morphogenesis
GO:0007442 hindgut morphogenesis
GO:0016348 imaginal disc-derived leg joint morphogenesis
GO:0007480 imaginal disc-derived leg morphogenesis
GO:0035218 leg disc development
GO:0007478 leg disc morphogenesis
GO:0007449 proximal/distal pattern formation, imaginal disc

Cluster 35
GO:0035051 cardiac cell differentiation
GO:0035225 determination of genital disc primordium
GO:0007445 determination of imaginal disc primordium
GO:0007450 dorsal/ventral pattern formation, imaginal disc
GO:0007492 endoderm development
GO:0035215 genital disc development
GO:0016348 imaginal disc-derived leg joint morphogenesis
GO:0007392 initiation of dorsal closure

Cluster 36
GO:0007443 Malpighian tubule morphogenesis
GO:0048546 digestive tract morphogenesis
GO:0007439 ectodermal gut development
GO:0048567 ectodermal gut morphogenesis
GO:0048619 embryonic hindgut morphogenesis
GO:0007492 endoderm development
GO:0001706 endoderm formation
GO:0048732 gland development
GO:0022612 gland morphogenesis
GO:0048565 gut development
GO:0048547 gut morphogenesis
GO:0007442 hindgut morphogenesis
GO:0016331 morphogenesis of embryonic epithelium
GO:0007428 primary branching, open tracheal system
GO:0007431 salivary gland development
GO:0007435 salivary gland morphogenesis

Cluster 37
GO:0007443 Malpighian tubule morphogenesis
GO:0007375 anterior midgut invagination
GO:0048546 digestive tract morphogenesis
GO:0007499 ectoderm and mesoderm interaction
GO:0007439 ectodermal gut development
GO:0048567 ectodermal gut morphogenesis
GO:0048619 embryonic hindgut morphogenesis
GO:0048732 gland development
GO:0048565 gut development
GO:0048547 gut morphogenesis
GO:0007442 hindgut morphogenesis
GO:0007444 imaginal disc development
GO:0007560 imaginal disc morphogenesis
GO:0007447 imaginal disc pattern formation
GO:0007476 imaginal disc-derived wing morphogenesis
GO:0008586 imaginal disc-derived wing vein morphogenesis
GO:0007474 imaginal disc-derived wing vein specification
GO:0007498 mesoderm development
GO:0001707 mesoderm formation
GO:0048332 mesoderm morphogenesis
GO:0048333 mesodermal cell differentiation
GO:0001710 mesodermal cell fate commitment
GO:0007500 mesodermal cell fate determination
GO:0007501 mesodermal cell fate specification
GO:0002009 morphogenesis of an epithelium
GO:0016331 morphogenesis of embryonic epithelium
GO:0048513 organ development
GO:0009887 organ morphogenesis
GO:0007431 salivary gland development
GO:0009888 tissue development
GO:0048729 tissue morphogenesis
GO:0035220 wing disc development
GO:0007472 wing disc morphogenesis

Cluster 38
GO:0035051 cardiac cell differentiation
GO:0007394 dorsal closure, elongation of leading edge cells
GO:0007450 dorsal/ventral pattern formation, imaginal disc
GO:0007447 imaginal disc pattern formation
GO:0007392 initiation of dorsal closure
GO:0016333 morphogenesis of follicular epithelium

Cluster 39
GO:0007443 Malpighian tubule morphogenesis
GO:0007469 antennal development
GO:0048098 antennal joint development
GO:0007375 anterior midgut invagination
GO:0042675 compound eye cone cell differentiation
GO:0042676 compound eye cone cell fate commitment
GO:0042688 crystal cell differentiation
GO:0048546 digestive tract morphogenesis
GO:0007499 ectoderm and mesoderm interaction
GO:0007439 ectodermal gut development
GO:0048567 ectodermal gut morphogenesis
GO:0048619 embryonic hindgut morphogenesis
GO:0007492 endoderm development
GO:0001706 endoderm formation
GO:0042067 establishment of ommatidial polarity
GO:0010160 formation of organ boundary
GO:0035215 genital disc development
GO:0008406 gonad development
GO:0048565 gut development
GO:0048547 gut morphogenesis
GO:0007482 haltere development
GO:0007507 heart development
GO:0007516 hemocyte development
GO:0042386 hemocyte differentiation
GO:0030097 hemopoiesis
GO:0048534 hemopoietic or lymphoid organ development
GO:0007442 hindgut morphogenesis
GO:0016348 imaginal disc-derived leg joint morphogenesis
GO:0007480 imaginal disc-derived leg morphogenesis
GO:0007474 imaginal disc-derived wing vein specification
GO:0035167 larval lymph gland hemopoiesis
GO:0035218 leg disc development
GO:0007478 leg disc morphogenesis
GO:0048542 lymph gland development
GO:0007498 mesoderm development
GO:0001707 mesoderm formation
GO:0007509 mesoderm migration
GO:0048332 mesoderm morphogenesis
GO:0048333 mesodermal cell differentiation
GO:0001710 mesodermal cell fate commitment
GO:0007500 mesodermal cell fate determination
GO:0007501 mesodermal cell fate specification
GO:0008078 mesodermal cell migration
GO:0042690 negative regulation of crystal cell differentiation
GO:0045611 negative regulation of hemocyte differentiation
GO:0048645 organ formation
GO:0007513 pericardial cell differentiation
GO:0042387 plasmatocyte differentiation
GO:0035166 post-embryonic hemopoiesis
GO:0048569 post-embryonic organ development
GO:0007449 proximal/distal pattern formation, imaginal disc
GO:0042689 regulation of crystal cell differentiation
GO:0045610 regulation of hemocyte differentiation
GO:0007432 salivary gland boundary specification
GO:0008052 sensory organ boundary specification
GO:0016360 sensory organ precursor cell fate determination
GO:0048729 tissue morphogenesis
GO:0007419 ventral cord development

GO:0009887 organ morphogenesis

Cluster 1
GO:0042676 compound eye cone cell fate commitment

Cluster 2
GO:0001752 compound eye photoreceptor fate commitment
GO:0042706 eye photoreceptor cell fate commitment
GO:0010160 formation of organ boundary
GO:0007560 imaginal disc morphogenesis
GO:0007476 imaginal disc-derived wing morphogenesis
GO:0008586 imaginal disc-derived wing vein morphogenesis
GO:0048645 organ formation
GO:0007432 salivary gland boundary specification
GO:0007472 wing disc morphogenesis

Cluster 3
GO:0007443 Malpighian tubule morphogenesis
GO:0007375 anterior midgut invagination
GO:0048619 embryonic hindgut morphogenesis
GO:0001707 mesoderm formation
GO:0007509 mesoderm migration
GO:0048332 mesoderm morphogenesis
GO:0048333 mesodermal cell differentiation
GO:0001710 mesodermal cell fate commitment
GO:0007500 mesodermal cell fate determination
GO:0008078 mesodermal cell migration
GO:0007428 primary branching, open tracheal system

Cluster 4
GO:0007443 Malpighian tubule morphogenesis
GO:0007375 anterior midgut invagination
GO:0048619 embryonic hindgut morphogenesis
GO:0010160 formation of organ boundary
GO:0016348 imaginal disc-derived leg joint morphogenesis
GO:0001707 mesoderm formation
GO:0007509 mesoderm migration
GO:0048332 mesoderm morphogenesis
GO:0048333 mesodermal cell differentiation
GO:0001710 mesodermal cell fate commitment
GO:0007500 mesodermal cell fate determination
GO:0007501 mesodermal cell fate specification
GO:0048645 organ formation
GO:0007432 salivary gland boundary specification
GO:0048729 tissue morphogenesis

Cluster 5

Cluster 6
GO:0001746 Bolwig's organ morphogenesis
GO:0045466 R7 cell differentiation
GO:0007465 R7 cell fate commitment
GO:0042675 compound eye cone cell differentiation
GO:0042676 compound eye cone cell fate commitment
GO:0001751 compound eye photoreceptor cell differentiation
GO:0001752 compound eye photoreceptor fate commitment
GO:0046667 compound eye retinal cell programmed cell death
GO:0042067 establishment of ommatidial polarity
GO:0042706 eye photoreceptor cell fate commitment
GO:0007455 eye-antennal disc morphogenesis
GO:0010160 formation of organ boundary
GO:0048645 organ formation
GO:0046669 regulation of compound eye retinal cell programmed cell death
GO:0046668 regulation of retinal cell programmed cell death
GO:0008052 sensory organ boundary specification
GO:0016360 sensory organ precursor cell fate determination

Cluster 7
GO:0010160 formation of organ boundary
GO:0048645 organ formation
GO:0007428 primary branching, open tracheal system
GO:0008052 sensory organ boundary specification
GO:0016360 sensory organ precursor cell fate determination

Cluster 8
GO:0007443 Malpighian tubule morphogenesis
GO:0048546 digestive tract morphogenesis
GO:0048567 ectodermal gut morphogenesis
GO:0048619 embryonic hindgut morphogenesis
GO:0048547 gut morphogenesis
GO:0007442 hindgut morphogenesis
GO:0007428 primary branching, open tracheal system

Cluster 9
GO:0042067 establishment of ommatidial polarity
GO:0001736 establishment of planar polarity
GO:0001738 morphogenesis of a polarized epithelium

Cluster 10
GO:0009887 organ morphogenesis

Cluster 11
GO:0001751 compound eye photoreceptor cell differentiation
GO:0001754 eye photoreceptor cell differentiation
GO:0007455 eye-antennal disc morphogenesis

Cluster 12
GO:0007394 dorsal closure, elongation of leading edge cells
GO:0007392 initiation of dorsal closure

Cluster 13
GO:0010160 formation of organ boundary
GO:0008587 imaginal disc-derived wing margin morphogenesis
GO:0007509 mesoderm migration
GO:0008078 mesodermal cell migration
GO:0048645 organ formation
GO:0007432 salivary gland boundary specification
GO:0008052 sensory organ boundary specification
GO:0016360 sensory organ precursor cell fate determination
GO:0048729 tissue morphogenesis

Cluster 14
GO:0007443 Malpighian tubule morphogenesis
GO:0007375 anterior midgut invagination
GO:0048546 digestive tract morphogenesis
GO:0048567 ectodermal gut morphogenesis
GO:0048619 embryonic hindgut morphogenesis
GO:0030855 epithelial cell differentiation
GO:0048547 gut morphogenesis
GO:0007442 hindgut morphogenesis
GO:0001707 mesoderm formation
GO:0007509 mesoderm migration
GO:0048332 mesoderm morphogenesis
GO:0048333 mesodermal cell differentiation
GO:0001710 mesodermal cell fate commitment
GO:0007500 mesodermal cell fate determination
GO:0007501 mesodermal cell fate specification
GO:0008078 mesodermal cell migration
GO:0002009 morphogenesis of an epithelium
GO:0016331 morphogenesis of embryonic epithelium
GO:0048729 tissue morphogenesis

Cluster 15
GO:0042675 compound eye cone cell differentiation
GO:0042676 compound eye cone cell fate commitment
GO:0008586 imaginal disc-derived wing vein morphogenesis
GO:0007474 imaginal disc-derived wing vein specification
GO:0007392 initiation of dorsal closure
GO:0016333 morphogenesis of follicular epithelium
GO:0007458 progression of morphogenetic furrow during compound eye morphogenesis

Cluster 16
GO:0007432 salivary gland boundary specification

Cluster 17
GO:0048800 antennal morphogenesis
GO:0042675 compound eye cone cell differentiation
GO:0042676 compound eye cone cell fate commitment
GO:0042679 compound eye cone cell fate specification
GO:0046667 compound eye retinal cell programmed cell death
GO:0007480 imaginal disc-derived leg morphogenesis
GO:0007478 leg disc morphogenesis
GO:0016333 morphogenesis of follicular epithelium
GO:0042683 negative regulation of compound eye cone cell fate specification
GO:0007458 progression of morphogenetic furrow during compound eye morphogenesis
GO:0042682 regulation of compound eye cone cell fate specification
GO:0046666 retinal cell programmed cell death
GO:0008052 sensory organ boundary specification
GO:0016360 sensory organ precursor cell fate determination

Cluster 18
GO:0016334 establishment or maintenance of polarity of follicular epithelium
GO:0016333 morphogenesis of follicular epithelium

Cluster 19
GO:0007443 Malpighian tubule morphogenesis
GO:0007375 anterior midgut invagination
GO:0048619 embryonic hindgut morphogenesis
GO:0010160 formation of organ boundary
GO:0007560 imaginal disc morphogenesis
GO:0007476 imaginal disc-derived wing morphogenesis
GO:0008586 imaginal disc-derived wing vein morphogenesis
GO:0007474 imaginal disc-derived wing vein specification
GO:0001707 mesoderm formation
GO:0048332 mesoderm morphogenesis
GO:0048333 mesodermal cell differentiation
GO:0001710 mesodermal cell fate commitment
GO:0007500 mesodermal cell fate determination
GO:0007501 mesodermal cell fate specification
GO:0002009 morphogenesis of an epithelium
GO:0016331 morphogenesis of embryonic epithelium
GO:0048645 organ formation
GO:0007432 salivary gland boundary specification
GO:0048729 tissue morphogenesis
GO:0007472 wing disc morphogenesis

Cluster 20
GO:0007432 salivary gland boundary specification

Cluster 21

Cluster 22
GO:0045467 R7 cell development
GO:0045466 R7 cell differentiation
GO:0007465 R7 cell fate commitment
GO:0008052 sensory organ boundary specification

Cluster 23
GO:0042067 establishment of ommatidial polarity
GO:0008586 imaginal disc-derived wing vein morphogenesis

Cluster 24

Cluster 25

Cluster 26

Cluster 27
GO:0007465 R7 cell fate commitment
GO:0001752 compound eye photoreceptor fate commitment
GO:0046667 compound eye retinal cell programmed cell death
GO:0042067 establishment of ommatidial polarity
GO:0001736 establishment of planar polarity
GO:0042706 eye photoreceptor cell fate commitment
GO:0007455 eye-antennal disc morphogenesis
GO:0007480 imaginal disc-derived leg morphogenesis
GO:0007474 imaginal disc-derived wing vein specification
GO:0001707 mesoderm formation
GO:0048332 mesoderm morphogenesis
GO:0001738 morphogenesis of a polarized epithelium
GO:0016318 ommatidial rotation
GO:0046666 retinal cell programmed cell death
GO:0048729 tissue morphogenesis

Cluster 28
GO:0007474 imaginal disc-derived wing vein specification
GO:0001707 mesoderm formation
GO:0048332 mesoderm morphogenesis

Cluster 29

Cluster 30

Cluster 31

Cluster 32

Cluster 33
GO:0042675 compound eye cone cell differentiation
GO:0042676 compound eye cone cell fate commitment
GO:0042679 compound eye cone cell fate specification
GO:0016348 imaginal disc-derived leg joint morphogenesis
GO:0042683 negative regulation of compound eye cone cell fate specification
GO:0007458 progression of morphogenetic furrow during compound eye morphogenesis
GO:0042682 regulation of compound eye cone cell fate specification

Cluster 34
GO:0048546 digestive tract morphogenesis
GO:0048567 ectodermal gut morphogenesis
GO:0030855 epithelial cell differentiation
GO:0007440 foregut morphogenesis
GO:0048547 gut morphogenesis
GO:0007442 hindgut morphogenesis
GO:0016348 imaginal disc-derived leg joint morphogenesis
GO:0007480 imaginal disc-derived leg morphogenesis
GO:0007478 leg disc morphogenesis

Cluster 35
GO:0016348 imaginal disc-derived leg joint morphogenesis
GO:0007392 initiation of dorsal closure

Cluster 36
GO:0007443 Malpighian tubule morphogenesis
GO:0048546 digestive tract morphogenesis
GO:0048567 ectodermal gut morphogenesis
GO:0048619 embryonic hindgut morphogenesis
GO:0048547 gut morphogenesis
GO:0007442 hindgut morphogenesis
GO:0016331 morphogenesis of embryonic epithelium
GO:0007428 primary branching, open tracheal system

Cluster 37
GO:0007443 Malpighian tubule morphogenesis
GO:0007375 anterior midgut invagination
GO:0048546 digestive tract morphogenesis
GO:0048567 ectodermal gut morphogenesis
GO:0048619 embryonic hindgut morphogenesis
GO:0048547 gut morphogenesis
GO:0007442 hindgut morphogenesis
GO:0007560 imaginal disc morphogenesis
GO:0007476 imaginal disc-derived wing morphogenesis
GO:0008586 imaginal disc-derived wing vein morphogenesis
GO:0007474 imaginal disc-derived wing vein specification
GO:0001707 mesoderm formation
GO:0048332 mesoderm morphogenesis
GO:0048333 mesodermal cell differentiation
GO:0001710 mesodermal cell fate commitment
GO:0007500 mesodermal cell fate determination
GO:0007501 mesodermal cell fate specification
GO:0002009 morphogenesis of an epithelium
GO:0016331 morphogenesis of embryonic epithelium
GO:0009887 organ morphogenesis
GO:0048729 tissue morphogenesis
GO:0007472 wing disc morphogenesis

Cluster 38
GO:0007394 dorsal closure, elongation of leading edge cells
GO:0007392 initiation of dorsal closure
GO:0016333 morphogenesis of follicular epithelium

Cluster 39
GO:0007443 Malpighian tubule morphogenesis
GO:0007375 anterior midgut invagination
GO:0042675 compound eye cone cell differentiation
GO:0042676 compound eye cone cell fate commitment
GO:0048546 digestive tract morphogenesis
GO:0048567 ectodermal gut morphogenesis
GO:0048619 embryonic hindgut morphogenesis
GO:0042067 establishment of ommatidial polarity
GO:0010160 formation of organ boundary
GO:0048547 gut morphogenesis
GO:0007442 hindgut morphogenesis
GO:0016348 imaginal disc-derived leg joint morphogenesis
GO:0007480 imaginal disc-derived leg morphogenesis
GO:0007474 imaginal disc-derived wing vein specification
GO:0007478 leg disc morphogenesis
GO:0001707 mesoderm formation
GO:0007509 mesoderm migration
GO:0048332 mesoderm morphogenesis
GO:0048333 mesodermal cell differentiation
GO:0001710 mesodermal cell fate commitment
GO:0007500 mesodermal cell fate determination
GO:0007501 mesodermal cell fate specification
GO:0008078 mesodermal cell migration
GO:0048645 organ formation
GO:0007432 salivary gland boundary specification
GO:0008052 sensory organ boundary specification
GO:0016360 sensory organ precursor cell fate determination
GO:0048729 tissue morphogenesis

GO:0007444 imaginal disc development

Cluster 1
GO:0048190 wing disc dorsal/ventral pattern formation

Cluster 2
GO:0007444 imaginal disc development
GO:0007560 imaginal disc morphogenesis
GO:0007447 imaginal disc pattern formation
GO:0007476 imaginal disc-derived wing morphogenesis
GO:0008586 imaginal disc-derived wing vein morphogenesis
GO:0035218 leg disc development
GO:0035223 leg disc pattern formation
GO:0007479 leg disc proximal/distal pattern formation
GO:0007449 proximal/distal pattern formation, imaginal disc
GO:0035220 wing disc development
GO:0007472 wing disc morphogenesis

Cluster 3
GO:0007487 analia development
GO:0035224 genital disc anterior/posterior pattern formation
GO:0035215 genital disc development
GO:0035221 genital disc pattern formation

Cluster 4
GO:0007487 analia development
GO:0035215 genital disc development
GO:0007482 haltere development
GO:0016348 imaginal disc-derived leg joint morphogenesis

Cluster 5
GO:0035222 wing disc pattern formation

Cluster 6
GO:0007448 anterior/posterior pattern formation, imaginal disc
GO:0035214 eye-antennal disc development
GO:0007455 eye-antennal disc morphogenesis
GO:0035215 genital disc development
GO:0048100 wing disc anterior/posterior pattern formation

Cluster 7

Cluster 8
GO:0007487 analia development
GO:0035215 genital disc development

Cluster 9
GO:0035218 leg disc development

Cluster 10

Cluster 11
GO:0007455 eye-antennal disc morphogenesis
GO:0035215 genital disc development

Cluster 12
GO:0007450 dorsal/ventral pattern formation, imaginal disc
GO:0007447 imaginal disc pattern formation

Cluster 13
GO:0008587 imaginal disc-derived wing margin morphogenesis

Cluster 14
GO:0007469 antennal development

Cluster 15
GO:0007450 dorsal/ventral pattern formation, imaginal disc
GO:0007447 imaginal disc pattern formation
GO:0008586 imaginal disc-derived wing vein morphogenesis
GO:0007474 imaginal disc-derived wing vein specification

Cluster 16
GO:0035223 leg disc pattern formation
GO:0007479 leg disc proximal/distal pattern formation
GO:0007449 proximal/distal pattern formation, imaginal disc

Cluster 17
GO:0007469 antennal development
GO:0048800 antennal morphogenesis
GO:0007450 dorsal/ventral pattern formation, imaginal disc
GO:0007480 imaginal disc-derived leg morphogenesis
GO:0007478 leg disc morphogenesis

Cluster 18
GO:0007450 dorsal/ventral pattern formation, imaginal disc
GO:0007447 imaginal disc pattern formation

Cluster 19
GO:0035215 genital disc development
GO:0007444 imaginal disc development
GO:0007446 imaginal disc growth
GO:0007560 imaginal disc morphogenesis
GO:0007447 imaginal disc pattern formation
GO:0007476 imaginal disc-derived wing morphogenesis
GO:0008586 imaginal disc-derived wing vein morphogenesis
GO:0007474 imaginal disc-derived wing vein specification
GO:0007449 proximal/distal pattern formation, imaginal disc
GO:0035220 wing disc development
GO:0007472 wing disc morphogenesis

Cluster 20
GO:0035215 genital disc development

Cluster 21

Cluster 22

Cluster 23
GO:0008586 imaginal disc-derived wing vein morphogenesis

Cluster 24

Cluster 25

Cluster 26

Cluster 27
GO:0007448 anterior/posterior pattern formation, imaginal disc
GO:0007450 dorsal/ventral pattern formation, imaginal disc
GO:0035214 eye-antennal disc development
GO:0007455 eye-antennal disc morphogenesis
GO:0035215 genital disc development
GO:0007447 imaginal disc pattern formation
GO:0007480 imaginal disc-derived leg morphogenesis
GO:0007474 imaginal disc-derived wing vein specification
GO:0035218 leg disc development
GO:0048100 wing disc anterior/posterior pattern formation
GO:0048190 wing disc dorsal/ventral pattern formation
GO:0035222 wing disc pattern formation

Cluster 28
GO:0007474 imaginal disc-derived wing vein specification

Cluster 29

Cluster 30

Cluster 31
GO:0007450 dorsal/ventral pattern formation, imaginal disc

Cluster 32

Cluster 33
GO:0007450 dorsal/ventral pattern formation, imaginal disc
GO:0016348 imaginal disc-derived leg joint morphogenesis
GO:0048190 wing disc dorsal/ventral pattern formation
GO:0035222 wing disc pattern formation

Cluster 34
GO:0048098 antennal joint development
GO:0035225 determination of genital disc primordium
GO:0007445 determination of imaginal disc primordium
GO:0035215 genital disc development
GO:0016348 imaginal disc-derived leg joint morphogenesis
GO:0007480 imaginal disc-derived leg morphogenesis
GO:0035218 leg disc development
GO:0007478 leg disc morphogenesis
GO:0007449 proximal/distal pattern formation, imaginal disc

Cluster 35
GO:0035225 determination of genital disc primordium
GO:0007445 determination of imaginal disc primordium
GO:0007450 dorsal/ventral pattern formation, imaginal disc
GO:0035215 genital disc development
GO:0016348 imaginal disc-derived leg joint morphogenesis

Cluster 36

Cluster 37
GO:0007444 imaginal disc development
GO:0007560 imaginal disc morphogenesis
GO:0007447 imaginal disc pattern formation
GO:0007476 imaginal disc-derived wing morphogenesis
GO:0008586 imaginal disc-derived wing vein morphogenesis
GO:0007474 imaginal disc-derived wing vein specification
GO:0035220 wing disc development
GO:0007472 wing disc morphogenesis

Cluster 38
GO:0007450 dorsal/ventral pattern formation, imaginal disc
GO:0007447 imaginal disc pattern formation

Cluster 39
GO:0007469 antennal development
GO:0048098 antennal joint development
GO:0035215 genital disc development
GO:0007482 haltere development
GO:0016348 imaginal disc-derived leg joint morphogenesis
GO:0007480 imaginal disc-derived leg morphogenesis
GO:0007474 imaginal disc-derived wing vein specification
GO:0035218 leg disc development
GO:0007478 leg disc morphogenesis
GO:0007449 proximal/distal pattern formation, imaginal disc

GO:0007423 sensory organ development

Cluster 1
GO:0042676 compound eye cone cell fate commitment

Cluster 2
GO:0001752 compound eye photoreceptor fate commitment
GO:0042706 eye photoreceptor cell fate commitment

Cluster 3

Cluster 4

Cluster 5

Cluster 6
GO:0055034 Bolwig's organ development
GO:0001746 Bolwig's organ morphogenesis
GO:0045466 R7 cell differentiation
GO:0007465 R7 cell fate commitment
GO:0042675 compound eye cone cell differentiation
GO:0042676 compound eye cone cell fate commitment
GO:0001751 compound eye photoreceptor cell differentiation
GO:0001752 compound eye photoreceptor fate commitment
GO:0046667 compound eye retinal cell programmed cell death
GO:0042067 establishment of ommatidial polarity
GO:0042706 eye photoreceptor cell fate commitment
GO:0046669 regulation of compound eye retinal cell programmed cell death
GO:0046668 regulation of retinal cell programmed cell death
GO:0008052 sensory organ boundary specification
GO:0016360 sensory organ precursor cell fate determination

Cluster 7
GO:0008052 sensory organ boundary specification
GO:0045035 sensory organ precursor cell division
GO:0016360 sensory organ precursor cell fate determination

Cluster 8

Cluster 9
GO:0042067 establishment of ommatidial polarity

Cluster 10

Cluster 11
GO:0001751 compound eye photoreceptor cell differentiation
GO:0001754 eye photoreceptor cell differentiation

Cluster 12

Cluster 13
GO:0008052 sensory organ boundary specification
GO:0016360 sensory organ precursor cell fate determination

Cluster 14

Cluster 15
GO:0042675 compound eye cone cell differentiation
GO:0042676 compound eye cone cell fate commitment
GO:0007458 progression of morphogenetic furrow during compound eye morphogenesis

Cluster 16

Cluster 17
GO:0042675 compound eye cone cell differentiation
GO:0042676 compound eye cone cell fate commitment
GO:0042679 compound eye cone cell fate specification
GO:0046667 compound eye retinal cell programmed cell death
GO:0042683 negative regulation of compound eye cone cell fate specification
GO:0007458 progression of morphogenetic furrow during compound eye morphogenesis
GO:0042682 regulation of compound eye cone cell fate specification
GO:0046666 retinal cell programmed cell death
GO:0008052 sensory organ boundary specification
GO:0016360 sensory organ precursor cell fate determination

Cluster 18

Cluster 19

Cluster 20

Cluster 21

Cluster 22
GO:0045467 R7 cell development
GO:0045466 R7 cell differentiation
GO:0007465 R7 cell fate commitment
GO:0008052 sensory organ boundary specification

Cluster 23
GO:0042067 establishment of ommatidial polarity

Cluster 24

Cluster 25

Cluster 26

Cluster 27
GO:0007465 R7 cell fate commitment
GO:0001752 compound eye photoreceptor fate commitment
GO:0046667 compound eye retinal cell programmed cell death
GO:0042067 establishment of ommatidial polarity
GO:0042706 eye photoreceptor cell fate commitment
GO:0016318 ommatidial rotation
GO:0046666 retinal cell programmed cell death

Cluster 28

Cluster 29

Cluster 30

Cluster 31

Cluster 32

Cluster 33
GO:0042675 compound eye cone cell differentiation
GO:0042676 compound eye cone cell fate commitment
GO:0042679 compound eye cone cell fate specification
GO:0042683 negative regulation of compound eye cone cell fate specification
GO:0007458 progression of morphogenetic furrow during compound eye morphogenesis
GO:0045468 regulation of R8 cell spacing in compound eye
GO:0042682 regulation of compound eye cone cell fate specification

Cluster 34

Cluster 35

Cluster 36

Cluster 37

Cluster 38

Cluster 39
GO:0042675 compound eye cone cell differentiation
GO:0042676 compound eye cone cell fate commitment
GO:0042067 establishment of ommatidial polarity
GO:0008052 sensory organ boundary specification
GO:0016360 sensory organ precursor cell fate determination

GO:0009888 tissue development

Cluster 1

Cluster 2
GO:0014706 striated muscle development

Cluster 3
GO:0007375 anterior midgut invagination
GO:0007499 ectoderm and mesoderm interaction
GO:0007492 endoderm development
GO:0001706 endoderm formation
GO:0001707 mesoderm formation
GO:0007509 mesoderm migration
GO:0048332 mesoderm morphogenesis
GO:0048333 mesodermal cell differentiation
GO:0001710 mesodermal cell fate commitment
GO:0007500 mesodermal cell fate determination
GO:0008078 mesodermal cell migration
GO:0007428 primary branching, open tracheal system

Cluster 4
GO:0007375 anterior midgut invagination
GO:0007499 ectoderm and mesoderm interaction
GO:0007506 gonadal mesoderm development
GO:0001707 mesoderm formation
GO:0007509 mesoderm migration
GO:0048332 mesoderm morphogenesis
GO:0048333 mesodermal cell differentiation
GO:0001710 mesodermal cell fate commitment
GO:0007500 mesodermal cell fate determination
GO:0007501 mesodermal cell fate specification
GO:0048729 tissue morphogenesis

Cluster 5

Cluster 6
GO:0042067 establishment of ommatidial polarity
GO:0048641 regulation of skeletal muscle development
GO:0048742 regulation of skeletal muscle fiber development
GO:0008582 regulation of synaptic growth at neuromuscular junction

Cluster 7
GO:0007428 primary branching, open tracheal system

Cluster 8
GO:0007428 primary branching, open tracheal system

Cluster 9
GO:0042067 establishment of ommatidial polarity
GO:0001736 establishment of planar polarity
GO:0001738 morphogenesis of a polarized epithelium

Cluster 10

Cluster 11
GO:0007498 mesoderm development

Cluster 12
GO:0007394 dorsal closure, elongation of leading edge cells
GO:0007392 initiation of dorsal closure

Cluster 13
GO:0007498 mesoderm development
GO:0007509 mesoderm migration
GO:0008078 mesodermal cell migration
GO:0048729 tissue morphogenesis

Cluster 14
GO:0007375 anterior midgut invagination
GO:0007499 ectoderm and mesoderm interaction
GO:0030855 epithelial cell differentiation
GO:0007506 gonadal mesoderm development
GO:0007498 mesoderm development
GO:0001707 mesoderm formation
GO:0007509 mesoderm migration
GO:0048332 mesoderm morphogenesis
GO:0048333 mesodermal cell differentiation
GO:0001710 mesodermal cell fate commitment
GO:0007500 mesodermal cell fate determination
GO:0007501 mesodermal cell fate specification
GO:0008078 mesodermal cell migration
GO:0002009 morphogenesis of an epithelium
GO:0016331 morphogenesis of embryonic epithelium
GO:0009888 tissue development
GO:0048729 tissue morphogenesis

Cluster 15
GO:0007398 ectoderm development
GO:0007392 initiation of dorsal closure
GO:0016333 morphogenesis of follicular epithelium

Cluster 16

Cluster 17
GO:0035072 ecdysone-mediated induction of salivary gland cell autophagic cell death
GO:0016333 morphogenesis of follicular epithelium

Cluster 18
GO:0016334 establishment or maintenance of polarity of follicular epithelium
GO:0016333 morphogenesis of follicular epithelium

Cluster 19
GO:0007375 anterior midgut invagination
GO:0007499 ectoderm and mesoderm interaction
GO:0007498 mesoderm development
GO:0001707 mesoderm formation
GO:0048332 mesoderm morphogenesis
GO:0048333 mesodermal cell differentiation
GO:0001710 mesodermal cell fate commitment
GO:0007500 mesodermal cell fate determination
GO:0007501 mesodermal cell fate specification
GO:0002009 morphogenesis of an epithelium
GO:0016331 morphogenesis of embryonic epithelium
GO:0007519 skeletal muscle development
GO:0014706 striated muscle development
GO:0048729 tissue morphogenesis

Cluster 20
GO:0007492 endoderm development
GO:0001706 endoderm formation
GO:0045887 positive regulation of synaptic growth at neuromuscular junction
GO:0016202 regulation of striated muscle development

Cluster 21

Cluster 22

Cluster 23
GO:0007398 ectoderm development
GO:0042067 establishment of ommatidial polarity
GO:0007498 mesoderm development
GO:0009888 tissue development

Cluster 24

Cluster 25

Cluster 26

Cluster 27
GO:0007398 ectoderm development
GO:0042067 establishment of ommatidial polarity
GO:0001736 establishment of planar polarity
GO:0007498 mesoderm development
GO:0001707 mesoderm formation
GO:0048332 mesoderm morphogenesis
GO:0001738 morphogenesis of a polarized epithelium
GO:0016318 ommatidial rotation
GO:0048729 tissue morphogenesis

Cluster 28
GO:0001707 mesoderm formation
GO:0048332 mesoderm morphogenesis

Cluster 29

Cluster 30

Cluster 31

Cluster 32

Cluster 33

Cluster 34
GO:0030855 epithelial cell differentiation

Cluster 35
GO:0007492 endoderm development
GO:0007392 initiation of dorsal closure

Cluster 36
GO:0007492 endoderm development
GO:0001706 endoderm formation
GO:0016331 morphogenesis of embryonic epithelium
GO:0007428 primary branching, open tracheal system

Cluster 37
GO:0007375 anterior midgut invagination
GO:0007499 ectoderm and mesoderm interaction
GO:0007498 mesoderm development
GO:0001707 mesoderm formation
GO:0048332 mesoderm morphogenesis
GO:0048333 mesodermal cell differentiation
GO:0001710 mesodermal cell fate commitment
GO:0007500 mesodermal cell fate determination
GO:0007501 mesodermal cell fate specification
GO:0002009 morphogenesis of an epithelium
GO:0016331 morphogenesis of embryonic epithelium
GO:0009888 tissue development
GO:0048729 tissue morphogenesis

Cluster 38
GO:0007394 dorsal closure, elongation of leading edge cells
GO:0007392 initiation of dorsal closure
GO:0016333 morphogenesis of follicular epithelium

Cluster 39
GO:0007375 anterior midgut invagination
GO:0007499 ectoderm and mesoderm interaction
GO:0007492 endoderm development
GO:0001706 endoderm formation
GO:0042067 establishment of ommatidial polarity
GO:0007498 mesoderm development
GO:0001707 mesoderm formation
GO:0007509 mesoderm migration
GO:0048332 mesoderm morphogenesis
GO:0048333 mesodermal cell differentiation
GO:0001710 mesodermal cell fate commitment
GO:0007500 mesodermal cell fate determination
GO:0007501 mesodermal cell fate specification
GO:0008078 mesodermal cell migration
GO:0048729 tissue morphogenesis