GadFly: Sequence Similarity

This data is out of date, based on Release 2. Please see Release 3 Notes and query Release 3.1 [HERE] for the most up-to-date data.

Every mRNA sequence was BLASTed against every other mRNA sequence in the complete transcript collection of January 2000. If the hits were mutual (A hit B and B hit A) then a connection was recorded. If there were also connections from C to A and from C to B then A, B, and C were grouped. New members were added to groups as long as more than 80% of all possible connections were present. These groups, that are based on these sequence similarities alone, have been subsequently organized by a majority vote according to the biological functional categories of the member mRNAs in order to facilitate browsing the results.

3-methyl-2-oxobutanoate dehdyrogenase (lipoamide) DNA binding DNA repair protein
DNA replication factor G protein linked receptor
GTP binding RNA binding
RNA polymerase II transcription factor Undetermined Unknown actin binding
acyl-CoA dehydrogenase adenylate kinase
alanine--tRNA ligase amine oxidase (flavin-containing)
apoptosis inhibitor arginine--tRNA ligase
calcium binding calpain
cell adhesion cell cycle regulator
chaperone cholinephosphate cytidylyltransferase chromatin binding cyclin-dependent protein kinase
cytochrome P450 cytoskeletal structural protein
immunity protein diazepam-binding inhibitor
electron transfer endopeptidase
enzyme enzyme activator enzyme inhibitor glutathione transferase
glycerol kinase heat shock protein
ion channel ketohexokinase
larval serum protein ligand binding or carrier
lysophospholipase lysozyme malate dehydrogenase (oxaloacetate decarboxylating) motor protein
neurotransmitter transporter nucleic acid binding
olfactory receptor peptidase
pheromone binding protein kinase
protein phosphatase receptor
ribosomal protein serpin
signal transduction steroid hormone receptor
storage protein structural protein
thioredoxin transcription factor transcription factor binding transketolase
translation factor transmembrane receptor
transporter tubulinyl--tyrosine ligase tumor suppressor ubiquitin
valine--tRNA ligase xylulokinase